Vulpes vulpes (red fox): 112919457
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Entry
112919457 CDS
T05911
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03015
mRNA surveillance pathway
vvp05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112919457 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
112919457 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112919457 (HBS1L)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112919457 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
112919457
NCBI-ProteinID:
XP_025853653
UniProt:
A0A3Q7SC27
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSQRDKPSLVEPVEEYDYE
GLKESSSSLLNHQLSGIDQARLYSCLDHMREVLGDAVPDDTLIDAVLKNKFDVQKALAVV
LEQETMQNWKVKSEGEISSGKIAKGKSIDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTLQKGHLSEETSIASSDVLDTVSKSVLPSHTIQTSEEQNSPSVPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSGELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKSCTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtcgaggatgattattgtatttcgccatcaacagctgctcagttt
atttactctcagcgcgacaaaccttcccttgttgagcctgtagaagaatacgattacgaa
ggcctgaaagagtcctccagttctcttttgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
actttgattgatgcagttctgaagaacaagtttgatgtgcagaaggctctggcagtggtt
ctggaacaagagacaatgcagaattggaaggtcaagagtgagggagaaatatcttcaggg
aagatagcaaaaggaaaatcaatagattctcagtcatctcgaagtgaatctgaaattgtg
cccaaagttgccaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaactgaagaaaatggtcatagtttccacacacttcaaaaaggacatcttagtgaa
gaaaccagcattgcttcttctgatgttcttgacactgtttctaaatcagttctcccatcc
cacaccattcaaacatcagaagagcagaattcaccatcagtaccggtgaagaaatctggc
aagctgaggcagcaaatagatgtcaaagcggaactggagaagcggcaaggagggaagcag
ctcctcaacttggtggtcatcggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccacaaccaaagtt
attacattaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcggatgtagccattttagttgtagacgccagcaggggagagtttgaagctgga
tttgagactgggggacagactcgagaacacggcctcttggttcgttctcttggagtaaca
cagcttgcagttgcagtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaaacttgggcactttcttaagcaagcaggctttaaggaaagtgatgtg
gcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcaatcaggt
gaactcacaaaatggtataaaggactatgtttattagaacaaattgattccttcaagcct
cctcagagatctattgataagccttttagattatgtgtatctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctactagcaatgcctcctaacgaaacttgtactgcaaaaggaatcactctgcatgatgaa
ccggtcgactgggcggcagcaggtgatcatgttagtcttacgttagttgggatggatatc
atcaagatcaatgttggctgcatattttgtggccccaaagagcccattaaatcttgcact
cgtttcagagctcgaatcctcatctttaatattgaaattcctattactaaaggatttcct
gtgctgttacactaccagactgtcagtgaacctgctgttattaaacgattgattagtgtc
ttaaacaaaagcacaggtgaagtgacaaagaagaagccaaaattattgaccaaaggccag
aatgccttggtggagctgcagacacaaaggccagttgctctggagctgtacaaagacttc
aaagagctggggaggttcatgctgcgctacagtggttctacgattgcggcaggcgtggtc
acggagataaaagaatga
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