Vulpes vulpes (red fox): 112919980
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Entry
112919980 CDS
T05911
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp04140
Autophagy - animal
vvp04148
Efferocytosis
vvp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112919980 (VPS39)
04148 Efferocytosis
112919980 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112919980 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvp04131
]
112919980 (VPS39)
Membrane trafficking [BR:
vvp04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
112919980 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Lgl_C
SAM_CEP-1_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
112919980
NCBI-ProteinID:
XP_025854315
UniProt:
A0A3Q7TGM0
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKEDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEHVIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRRKLLMFLEIS
GYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKHYDQNR
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccagtgccgatcctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaagaatggcttcttgttggcaccaaacaaggacatcttcttctctat
aggatccgaaaggatgctggttgcaacaggtttgaagtgacactagagaaatccaataaa
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctattgacctttcaacaaatcaccacagtt
tcaaaggcaaagggagcatcactattcacatgtgacctccaacacacagagactggtgag
gaggtattgcggatgtgtgtggccgtgaaaaagaagctgcagctctatttctggaaggat
agggaatttcatgaattgcagggggactttagtgtaccagatgtgcccaagtctatggca
tggtgtgaaaactctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaagggtccatcaaagagctctttccaacaggaaaacaactggagccgttagttgca
cctctggcagatggaaaagtggctgtgggtcaggatgatctcaccgtggtgctcaatgag
gaggggatctgcacacagaaatgtgccttgaactggacagacatcccagtggccatggag
caccagcctccctacatcattgcagttttgcctcgatatgtggagatccgaacatttgag
ccaaggcttctggtccagagcattgaattgcaaaggccccgcttcattacctctggagga
tcaaacataatctatgtggctagcaatcattttgtttggagactcattcctgtccccatg
gcaacccaaatccaacagcttctccaggacaagcagtttgaattggctctacagctcgca
gaaatgaaagaagattcagacagcgaaaagcagcaacagatccatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag
cttggcacagatcctacccatgtgatgggcctgtacccagacctgctgcccacagactac
agaaagcaactgcagtatcctaacccactgccagtgctgtcgggggctgaattggagaag
gcacatttagctctgattgactacctgacacagaaacgaagccaattggtaaagaagctg
aatgactctgatcaccagtctagcacctcccctctcatggaaggcactccgaccatcaaa
tccaagaagaagctattgcaaatcattgataccaccctgctcaagtgctacctccatacg
aacgtggccttggtggcgcctctgctgcgcctggagaacaatcactgccacattgaggag
agtgagcatgtgctgaagaaggcgcacaagtacagtgaactgataatcctgtatgagaag
aaggggctccatgagaaagctctgcaggtgctggtggaccagtccaagaaagcaaactcc
cctctgaaaggccatgagaggacagtgcagtatctgcaacatttgggcacagaaaaccta
catttgatattttcctactcggtatgggtgctgcgagacttcccagaggatggcctgaag
atatttaccgaagacctcccggaggtggaatctctgccacgagaccgagtgctcggcttc
ttagtggagaattttaagggtctagctattccttatctggagcatgtcattcacgtttgg
gaggagacaggctctcgattccacaactgcctgatccagctgtactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccctgcaggcaaaactccagtccctgctgga
gaggaagagggtgagctgggagagtaccgacggaagctccttatgttcttggaaatttca
ggctactatgatccaggccggctcatctgtgactttccttttgatggcctcttagaagag
cgtgcactgctgctggggcgcatgggaaagcatgagcaagcgctcttcatctacgtgcac
atcctgaaggacacaaagatggctgaggagtactgccacaagcattacgaccaaaacaga
gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcgccccctagtgtt
cattgcctgggacccatcaaactggaactgttggagccacaggccaacctccaggctgcc
ctgcaggtcctcgagctgcaccacagcaagctggacaccactaaggccatcaaccttcta
ccagcaaacactcagattaatgacatacgtatctttctggaaaaggtcttggaagaaaat
gcacaaaaaaaacggttcaatcaagtgctcaagaacctcctccatgcagaatttctgagg
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgtatggtgtgtaagaagaagattgggaacagtgcatttgcaagataccccaatggagtg
gtcgtgcactacttctgttccaaagaggtaaacccagccgacacctga
DBGET
integrated database retrieval system
