Vulpes vulpes (red fox): 112920580
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Entry
112920580 CDS
T05911
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03013
Nucleocytoplasmic transport
vvp03015
mRNA surveillance pathway
vvp03040
Spliceosome
vvp05014
Amyotrophic lateral sclerosis
vvp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112920580 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
112920580 (ALYREF)
03015 mRNA surveillance pathway
112920580 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112920580 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112920580 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112920580 (ALYREF)
03041 Spliceosome [BR:
vvp03041
]
112920580 (ALYREF)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112920580 (ALYREF)
TREX complex
112920580 (ALYREF)
Spliceosome [BR:
vvp03041
]
Complex C
Other components
EJC/TREX
112920580 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112920580 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
112920580
NCBI-ProteinID:
XP_025855188
UniProt:
A0A3Q7SFY8
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MQQRPGERSGGAGDAGGRRAGACGRRRVRGRRSRAACSCALLPPQPKQLPDKWQHDLFDS
GFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFE
RKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGG
TRRGTRGGSRGRGRGTGRSSKQQLSAEELDAQLDAYNARMDTS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaggccgggagaaaggagcggcggcgccggggacgccggggggcggcgggcg
ggggcgtgcgggcgccgcagggtccgcgggagacgctcacgggccgcgtgctcctgtgct
ctcctccccccgcagccgaaacaacttcccgacaagtggcagcacgacctcttcgacagc
ggcttcgggggcggcgccggcgtggagacgggtgggaaactgctggtgtccaacctggat
ttcggagtgtcggacgcggatattcaggaactctttgctgaattcggaactctgaagaag
gcagctgtacactatgaccgctccgggcgcagtttaggaacagccgatgtgcactttgaa
cggaaggcagatgccctgaaagctatgaaacagtacaacggtgtccctctggatggccgc
cccatgaacatccagctcgtcacgtcacagattgacacacagcggagaccggcgcagagc
gtaaacagaggtgggatgactagaaaccgcggctccggaggtttcggtggtggcggcggc
accaggagaggcactcgtggagggagccggggcagaggtcgaggcactggcaggagttcg
aagcagcagctttctgcagaggagttggatgcccagctggacgcttataacgcaagaatg
gacaccagctaa
DBGET
integrated database retrieval system