KEGG   Vulpes vulpes (red fox): 112920580
Entry
112920580         CDS       T05911                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03013  Nucleocytoplasmic transport
vvp03015  mRNA surveillance pathway
vvp03040  Spliceosome
vvp05014  Amyotrophic lateral sclerosis
vvp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112920580 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    112920580 (ALYREF)
   03015 mRNA surveillance pathway
    112920580 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112920580 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    112920580 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvp03019]
    112920580 (ALYREF)
   03041 Spliceosome [BR:vvp03041]
    112920580 (ALYREF)
Messenger RNA biogenesis [BR:vvp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112920580 (ALYREF)
    TREX complex
     112920580 (ALYREF)
Spliceosome [BR:vvp03041]
 Complex C
  Other components
   EJC/TREX
    112920580 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112920580 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz RRM_occluded RRM_5
Other DBs
NCBI-GeneID: 112920580
NCBI-ProteinID: XP_025855188
UniProt: A0A3Q7SFY8
LinkDB
Position
Unknown
AA seq 223 aa
MQQRPGERSGGAGDAGGRRAGACGRRRVRGRRSRAACSCALLPPQPKQLPDKWQHDLFDS
GFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFE
RKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGG
TRRGTRGGSRGRGRGTGRSSKQQLSAEELDAQLDAYNARMDTS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgcagcagaggccgggagaaaggagcggcggcgccggggacgccggggggcggcgggcg
ggggcgtgcgggcgccgcagggtccgcgggagacgctcacgggccgcgtgctcctgtgct
ctcctccccccgcagccgaaacaacttcccgacaagtggcagcacgacctcttcgacagc
ggcttcgggggcggcgccggcgtggagacgggtgggaaactgctggtgtccaacctggat
ttcggagtgtcggacgcggatattcaggaactctttgctgaattcggaactctgaagaag
gcagctgtacactatgaccgctccgggcgcagtttaggaacagccgatgtgcactttgaa
cggaaggcagatgccctgaaagctatgaaacagtacaacggtgtccctctggatggccgc
cccatgaacatccagctcgtcacgtcacagattgacacacagcggagaccggcgcagagc
gtaaacagaggtgggatgactagaaaccgcggctccggaggtttcggtggtggcggcggc
accaggagaggcactcgtggagggagccggggcagaggtcgaggcactggcaggagttcg
aagcagcagctttctgcagaggagttggatgcccagctggacgcttataacgcaagaatg
gacaccagctaa

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