Vulpes vulpes (red fox): 112920717
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Entry
112920717 CDS
T05911
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03040
Spliceosome
vvp05202
Transcriptional misregulation in cancer
vvp05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112920717 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
112920717 (DDX5)
05205 Proteoglycans in cancer
112920717 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvp03041
]
112920717 (DDX5)
03009 Ribosome biogenesis [BR:
vvp03009
]
112920717 (DDX5)
Enzymes [BR:
vvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112920717 (DDX5)
Spliceosome [BR:
vvp03041
]
Complex A
U1 snRNP components
U1 related factors
112920717 (DDX5)
Complex B
112920717 (DDX5)
Ribosome biogenesis [BR:
vvp03009
]
Eukaryotic type
Pre-60S particles
Helicases
112920717 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
112920717
NCBI-ProteinID:
XP_025855376
UniProt:
A0A3Q7SJ19
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSPLLKRDLGAKTQNGVYSAANY
TNGSFGNNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGNNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttgggggaagtagggcagggcccctatctggaaagaagtttggaaaccctggggagaaa
ctagtcaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggcgcacagcacaagaggtggagacatacaggaggagtaag
gaaattacggttagaggtcacaactgcccaaagccagttctgaatttttatgaagcaaac
ttccctgcaaatgtaatggatgtgattgcaagacagaattttactgaacccactgcaatt
caagctcagggatggcccgttgctctaagtggattggatatggttggagtagcacagact
ggatccgggaaaacattgtcttatttgctgcctgctatcgtccatatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccaactcgggaactggcc
caacaggtacagcaagtcgctgctgaatactgtagagcatgtcgattgaagtccacttgc
atctatggtggtgctcccaagggaccacagattcgtgatttggagagaggtgtggaaatc
tgtattgcaacacctggaagactgattgattttttagagtgtgggaaaaccaatctgaga
agaaccacttaccttgtccttgatgaagcagatagaatgcttgatatgggctttgaaccc
caaataaggaagattgtggatcagataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactacattcatata
aacattggtgcactggaactgagtgcaaatcacaacattcttcagattgtggatgtatgt
catgacgtagaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgagcttactagaaaa
atgaggagagatgggtggcccgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatactctgcgggc
aaaaggggtggttttaatacctttagagacagggaaaattatgacagaggttactctcct
ctgcttaagagagatttgggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaaataattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaatggttatgatagcactcagcaatatggaaataat
gttcccaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
