Vulpes vulpes (red fox): 112921091
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Entry
112921091 CDS
T05911
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112921091 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvp03041
]
112921091 (DDX23)
Enzymes [BR:
vvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112921091 (DDX23)
Spliceosome [BR:
vvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112921091 (DDX23)
Complex C
U5 SnRNP specific factors
112921091 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
112921091
NCBI-ProteinID:
XP_025856008
UniProt:
A0A3Q7TLM9
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MAGELADKKDRDASPSKEERKRSRTPERERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSR
SRSRSKSTERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEDDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE
VEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREE
KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK
QAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgacaaaaaggaccgggatgcatcaccttccaaggaggaaagg
aagcgatctcggactcctgagagagagcgagatagagaccgggaccggaagtcttcccca
tctaaagacaggaagcggcatcgttcaagggataggcgtcgaggaggcagccgttctcgc
tcccgttcccgttccaagtctacggaaagagagcgaaggcataaagaacgagaacgggat
aaggagcgtgatcggaataagaaggaccgagaccgggacaaggatgggcatagacgggac
aaggaccgtaaacgatccagtttatctcctgggcgaggaaaagattttaaatctcggaaa
gacagagactctaagaaggatgaagatgatgaacatggcgataagaagcctaaggctcag
ccgttatccctggaagaacttctggccaagaaaaaggctgaggaagaagctgaggcaaag
cccaagttcctctccaaagcagaacgagaggctgaagccctaaagcgacggcagcaggag
gtggaggagcggcagaggatgctcgaagaagagcggaagaaaaggaaacaattccaagac
ttgggcaggaaaatgttggaagaccctcaggaacgggagcgtcgggaacgcagggagagg
atggagcgggaaaccaatggaaatgaggatgaggaagggcggcagaagatccgggaggag
aaggataagagcaaggaactgcatgccatcaaggagcgttacctgggcggcatcaagaag
cggcgccgaacgaggcatctcaatgaccgcaagtttgtcttcgagtgggatgcatccgag
gacacatccatcgactacaaccccctatacaaagaacgacaccaggtgcagttgttgggg
cgaggcttcattgcaggcattgacctgaagcagcagaaacgagagcagtctcgtttctat
ggagacctaatggagaagaggcggacactggaagaaaaggagcaggaggaggccagactc
cgcaagctccgtaagaaggaagcaaagcagcgctgggatgatcggcactggtcccagaag
aagttagatgagatgacggacagggactggcggatcttcagagaggactacagcatcacc
accaaaggtggcaagatccccaatcccatccggtcctggaaagactcttctctgcccccg
cacatcttggaggtcatcgataagtgtggctataaggaaccaacacctatccagcgtcag
gcaatccccattgggctacagaatcgcgacatcattggtgtagctgagactggcagcggc
aagacagcggccttcctcatcccactgctggtctggatcaccactctccccaaaatcgac
aggatcgaagagtcagaccagggcccttacgccatcattctggcccccactcgtgagttg
gctcagcagattgaggaagagaccatcaagtttgggaagccactgggcatccgcactgtg
gccgtcattggcggcatctccagagaagaccagggcttcaggctgcgcatgggctgtgag
attgtcatcgctaccccaggacgtttgattgatgtgctggagaaccgttaccttgtactg
agccgctgtacctatgtggttctggatgaggcagataggatgattgacatgggctttgag
ccagatgtccagaagatcctggagcacatgcctgtcagcaaccagaagccagacacagat
gaggctgaggaccctgagaagatgttggccaactttgagtcgggaaaacataagtaccgc
caaaccgtcatgttcacggccaccatgcccccggcggtggagcgtctggcccggagctat
cttcggcgaccggctgtggtgtacattggctctgcgggcaagccccacgaacgtgtggaa
cagaaggtcttcctcatgtcagagtcagaaaagaggaaaaagctgctggcaatcttggaa
caaggctttgatccacccattatcatttttgtcaaccagaagaaaggctgtgatgttttg
gctaaatccctggagaagatggggtacaacgcttgcacgctgcacggtggaaaaggccag
gagcagcgagagtttgcactgtccaacctcaaggccggggccaaggatattttggtggct
acggacgtggcaggtcgtggtattgacatccaagatgtgtctatggttgtcaactatgat
atggccaaaaacattgaagattacatccaccgcattggccgcacgggccgagccggcaag
agtggtgtggccatcaccttcctcaccaaagaggattctgctgtgttctatgagctgaag
caagccatcctggagagcccagtgtcctcctgccccccagagctagccaaccacccagat
gcccagcacaagccaggcaccatcctcaccaagaagcgccgggaagaaactatctttgct
tga
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integrated database retrieval system
