Vulpes vulpes (red fox): 112921117
Help
Entry
112921117 CDS
T05911
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112921117 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvp03041
]
112921117 (PRPF40B)
Spliceosome [BR:
vvp03041
]
Complex A
U1 snRNP components
U1 related factors
112921117 (PRPF40B)
Complex B
112921117 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
112921117
NCBI-ProteinID:
XP_025856053
UniProt:
A0A3Q7SI76
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MGEWMKSLSKSQTVPVVQPPPSFLWLLGNKDSSEGARLAGSRLMEESRPSQGSLGAGHGQ
ETGPGDPSSELCAPFSSSPLCFPSAKAHLFAHPGSYDFSLPQQSVPDSGPRPPAAPAPFP
PGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIP
GMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDK
QSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQ
EAAGKQQQQQPQILQPQPPQPQPEPPPGPPGPTPLPLGLLEPEPGGSEDCDMSEAAQPVE
QGFLQQPEEGPSSAAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPS
NASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFL
EQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNI
QALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALERE
EEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLG
QPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAA
LDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVR
ERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSRSPSG
SESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDH
GLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAEVPNRSPG
FGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatggatgaaaagcctcagcaagagccagactgtgcctgtggtacagccgcct
ccatcttttctgtggcttttgggaaataaagacagcagtgaaggggcacggctggctggc
tctcggctgatggaagagagcagacctagccagggctcactcggagctgggcatgggcag
gaaactgggccaggagacccttcctctgaactttgtgctcctttttcatcctcaccgctc
tgcttcccttctgcaaaagcccatctctttgcccatcctgggtcctatgacttttctctc
cctcaacagtcggttcccgattctggtccccggcccccagcagcgcctgcccccttccca
ccggggccccccatgatgccaccacccttcatgccccctccaggaattcccccacccttt
cctccgatgggactgccccccatgagtcagagaccaccagccatccccccgatgcccccc
ggcatcatgcccccaatgcttccaccaatgggggcaccaccaccactcacgcagatacca
ggaatggtacctcccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcg
acggctccgggtgcggacacagccagctctgctgtggctgggacaggccctccgagggcc
ctgtggagtgagcatgtggcccctgacgggcgcatctactactacaatgctgacgacaag
cagtccgtgtgggagaagcccagcgtgctcaagtccaaggcagagttgctgctgtcccag
tgtccctggaaagagtacaagtcagacacgggcaaaccttactactataacaaccagagt
aaggagtctcgctggacccggcccaaggacctggatgacctggaggctttagtcaaacaa
gaggctgcagggaaacagcagcagcagcagccccagatactgcagccgcagccacctcag
ccccagcctgagcccccgcctgggccgcctggccccacccctctgcccctgggccttcta
gagcctgagccaggtgggagtgaagattgcgatatgtcagaggctgcccagcctgtggag
caggggtttctgcaacagccggaggagggccccagcagtgctgctggacagcatcagcca
ccacagcaggaggaagaggaatcaaagccagaaccagagaggtctggcctcagttggagc
aaccgggagaaggcaaagcaggccttcaaggagctgctgagggacaaggctgtcccctcc
aatgcctcgtgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttg
cccaaactgagtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggag
gagaaggaagaggcccggctaagggccaaggaggccaagcagaccttgcagcatttcctg
gagcagcatgaacgcatgacctccaccacccgctaccggcgagcagaacagacctttggg
gagctggaggtgtgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtc
ctcttcttcctggccaagaaggagaaggaacaagccaagcagctccggcgccgcaacatc
caggccctgaagagcatcctggatgggatgagtagtgtcaacttccaaactacatggtcc
caggcccagcagtacctcatggataaccccagctttgctcaggaccaccagctgcagaac
atggacaaggaagatgcactgatctgctttgaggagcacatccgagctttggagagggag
gaggaggaggagcgggagcgggcccgccttcgggagcggcgtcagcaacgcaagaaccgg
gaggccttccagaccttcctggacgagctgcacgaaacagggcagctgcactctatgtcc
acctggatggagctgtacccagcggtcagcactgatgtccgctttgccaacatgctgggc
cagccgggctccacccctctggacttgttcaagttctatgtggaagagttgaaggcacga
ttccatgatgagaagaagatcattaaggacatccttaaggaccggggcttctgcgtggag
gtgaacacagcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcg
ctggacgcaggcaacatcaagctgaccttcaatagtctgctggagaaagcagaggcgcgg
gagagagagcgggagaaggaggaggcgcgaaggatgcggcgccgggaggctgccttccgg
agcatgctgaggcaggccgtgccggccctggagctgggcactgcctgggaagaggtccgt
gagcgctttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcggatccgg
ctcttccgggagttcctgcaggtactggagactgaatgccagcacctccacaccaaaggc
cggaagcacggcagaaagggcaagaagcaccatcggaagcgttcccgctcgccctcaggc
tccgagtcggaagaggaggagctgcccccaccgtctctccgaccccccaagcggagaagg
cggaacccctcggagtcaggctctgagccctcgtcctcacttgattcggttgaaagtggg
ggtgctgcccttggaggacggggctccccgtcttctcgcctcctccttggatcagatcac
ggccttcggaaagccaagaaaccaaaaaagaaaactaagaagagacgacacaagtcgaac
agtcctgagagcgagacagaccccgaggagaaggctggcaaggagagtgatgagaaagaa
cccgaacaggacaaggaccgggagctccggcgggcagaagtccctaaccgttccccaggt
tttgggatcaagaaggagaagacgggctgggacacgtcagagagcgagctgagcgagggc
gagctggaaaggcggcggcggacgctcctgcagcagctggatgaccaccagtga
DBGET
integrated database retrieval system
