Vulpes vulpes (red fox): 112921645
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Entry
112921645 CDS
T05911
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
vvp
Vulpes vulpes (red fox)
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vvp04040
]
112921645 (SCN11A)
Ion channels [BR:
vvp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112921645 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
112921645
NCBI-ProteinID:
XP_025856772
UniProt:
A0A3Q7T828
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MTMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKRCKDKTTAEPQPRPQLDLKV
SRKLPKLYGDIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNPI
RSLAIKISVHSLFSMFIICTVIINCVFMATAHGKDKNNTDTDNAEYVFTGIYIFEALIKI
LARGFILDEFSFLRDPWNWLDSIVIVTAFVSYSPNTILNNSISMSSLRTFRVFRALKAIS
VVSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCIKASCTDINKL
SDSCFEKKNSSEFRMCGIWMGESACSEGFQCNHTKRNPDYNYTNFDNFGWSFLAMFRLMT
QDSWEKLYQQTLRASGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAK
EKMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSSKKRKLFGNRKRKSFFLRDSGKD
QTPGSDSDEDSTKKPHILEQTKRLSQNLSVDYCDDHGDPFQRQRALSAVSILTITMQEQE
KSQEPCLPCGENLASRYLVWNCSPRWLCIKKALRTVMTDPFTELAITVCIIINTVFLAME
HYKMDQSFESILYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFVDVM
INIIVGKQCPRVFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFS
VVGMQLFGSQFNSVKSNRRSCNPAVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQ
ETNQTLCIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALDRFH
RVFCIVIYTLEHFCHKWCRTQKSPKRTKVTGGPAAQSKDIIPLVTEMKRGPETREEHDQT
WLAPLAEEEDGFESSGENNAQHITQPEAGKQCQAFEFHQETKKSTSPGAQSVEIDVFSED
DICLSKQDPQKKSDTASVFSECSTIDPQDPFGRVTEMVLKKEPERCFPKGLGHCFPCCSM
NKRKSPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLEERPNIRDLLNC
TDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRAL
RPLRALSQFQGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINRTD
INSVINYSTIANQSQCEGGNLSWVNLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSR
GKEQQPGFEESPYNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKISGEDIFMTEEQK
KYYNAMKKLGSKKPQKPIPRPLNKCQGLMYDLVTNQVFDVIIIILIFLNMLSMMAESENQ
LDTTKFILDRLNLAFVVIFTIECLIKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALE
NQEHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFI
YAIFGMSCFCKVNEEFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRPMLQSKDSCNPN
LDSRHLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVW
EKFDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFT
TRVLGDSSGLDNMKVMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAIIQKAFRKYKVK
MSTYALEDRPGSPLHTLCNGDLSGSGVAEGKVHYD
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggatgacagatgctacccagtgatctttccagatgaacggaatttccgtccc
ttcacttctgatactctggctacaattgagaagaggattgccatccaaaaggagaaaaag
aggtgcaaagacaagacaacagcagaaccccagcctcggcctcagcttgacttaaaggtc
tccaggaagttgcccaagctctatggtgatattccccatgagctgatagcaaggcccctg
gaagacttggacccattctacagaaatcataagacatttatggtgttgaataaaaagaga
acaatctaccgcttcagtgccaagcgtgccttgttcattcttgggcctttcaatccaatc
cgaagtttagccatcaaaatctcagtccattcattgttcagcatgttcatcatctgcacc
gtcatcatcaactgcgtgttcatggccaccgctcatgggaaggacaaaaataatacagat
accgacaatgctgagtatgtcttcactgggatttatatttttgaagctttaataaaaata
ttggcaagaggttttattctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattgtaacagcgtttgtatcatactcaccaaataccatactcaacaac
agcatcagtatgtcatccctgcgtaccttccgagtgtttagagctttgaaagcaatttca
gtggtttcaggtctaaaagtcattgttggggccttgctacgctctgtgaagaagcttgtc
gacgtgatgatcctgactctcttttgcctcagcatcttcgccctggtgggtcagcagctc
ttcatgggaagtctgaaccaaagatgtatcaaggcgagctgtacggatatcaataaactt
agtgatagttgctttgaaaagaaaaattcctctgaattcagaatgtgtggcatctggatg
ggtgaaagtgcctgttctgaaggatttcaatgcaaccacaccaaaaggaatcctgactat
aattataccaattttgacaactttggttggtcttttcttgccatgtttcggcttatgacc
caagattcctgggagaagctttatcaacagaccttgcgtgcctcagggctcttctcagtt
ttcttctttgtggtagtcatcttcctgggctctttttacctgattaacttaaccctggct
gttgtcaccatggcttatgaggaacagaacagaaatgtagctgctgaaacagaggccaag
gaaaagatgtttcaggaagcccagcggctgctgaaggaggagaaggaggctctagttgcc
atgggaattgacagaagttcacttaattccctggaagcatcatctttttcctcaaagaag
agaaagctatttggtaataggaaaagaaagtccttttttttgagagactctgggaaagac
cagactccaggatcagattctgatgaagattccacaaaaaagcctcacatcctggagcaa
accaaacgactctcccagaatctatcagtggattattgtgatgatcacggggaccccttc
caaaggcagagggccctgagtgctgtcagcatcctcaccattaccatgcaggaacaagaa
aaatcacaggagccttgcctcccatgtggggaaaacctggcatccagatacctcgtgtgg
aattgtagtccacgttggctatgcattaagaaggccctgagaaccgtgatgactgacccc
tttactgagctggccatcaccgtctgcatcatcatcaatactgtcttcttggccatggag
cattacaaaatggaccagagttttgagtctatattgtacacagggaatttggttttcact
ggcattttcatggcagaaatgtgcctaaaaattattgcacttgatccctacaactacttt
cgccgaggctggaacatttttgacagcatcgttgctcttctgagttttgtagatgtgatg
atcaatataattgtaggaaaacaatgtccgagggttttccattccttgagagtgctgagg
gtcttcaagttagccaaatcctggccaactttaaacacactgattaagataattggccac
tccgttggagctctgggaaacctgactgtggtcctggctattgtggtctttattttctca
gtggttggcatgcagctttttggctctcaattcaattctgtaaagagtaatagaagatcc
tgcaaccctgcagtcccatgtttacgacgctggcacatgggggacttttaccattccttt
ctggtggtattccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaa
gaaacaaatcaaacactgtgcattgtcgtctttctgttgatcatggtgatagggaaactc
gtggtactcaacctcttcattgccttgctgctcaattccttcagtaatgaggagagagat
ggaaacttggatggagagtccaaaaaaaccaaagtccagttagccctggatcggttccac
cgggttttctgcattgttatatatactcttgagcatttttgtcacaagtggtgcaggact
caaaagtcaccaaagagaacaaaggtgacaggaggccctgctgcccaaagcaaagatatc
attccgttggtcacagagatgaaaaggggcccagagactagggaggagcatgatcagacg
tggttggccccacttgcagaggaagaggatggttttgaatcttctggagaaaacaatgca
cagcatatcacacaacctgaggctggaaaacagtgtcaggcctttgaattccatcaggag
accaagaagtccaccagcccaggagctcaaagtgtggaaattgacgtgttctctgaggat
gacatatgtttgtcaaaacaagatccccaaaagaagtctgatactgccagtgtgttctca
gaatgtagcaccattgatccacaggatccctttgggcgggtaactgaaatggttctcaaa
aaagaaccagagcgatgttttcccaaaggcctgggtcactgcttcccatgctgttccatg
aacaagagaaagtccccctggatcatttggtggaacctgcggaaaacctgctaccaaata
gtgaaacacagctggtttgagagctttattatctttgtgattctgctgagcagtggggca
ctggtatttgaagatatttaccttgaggaacgacccaatatccgagatttacttaattgt
actgaccatattttcacatacatttttatcctggagatgggtctaaaatgggtggccttt
ggatttgggaagtatttcaccagtgtctggtgctggctcgatttcatcattgtgattgtc
tctgtgaccagtctcattgacttaaagagcttgaagtcctttcggaccctacgagcactg
aggcccttgcgagcattgtcccagttccaaggaatgaaggtggtagtcaatgctctcata
ggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctggctgatattt
tgtatcctgggagtaaacttcttttctggaaaatttggaagatgcattaatagaacagat
ataaactcagttataaattacagcactattgcgaatcaaagtcaatgtgaaggtggaaat
ttatcttgggtcaaccttccagtcaactttgacaatgtgggaatggcttaccttgccctg
ctgcaagtggcaacatttaagggctggatggatattatgtatgcagctgtcgattccaga
gggaaagaacaacagccagggtttgaggaaagcccatacaactaccttttctttgtggct
tttatcatctttggttcattctttactctgaatctctttattggtgttataattgacaac
ttcaaccaacagcagaaaaagataagtggtgaagacatttttatgactgaagaacagaag
aaatactataatgcaatgaaaaaattaggatccaaaaaacctcaaaagcccattccaagg
cctctgaataaatgccagggtctcatgtatgacctagtcacaaaccaagtctttgacgtc
attatcatcatcctcattttcctcaacatgcttagcatgatggctgaatcagaaaaccag
cttgataccacaaaattcatccttgatcgtctcaacctggcctttgtggtcatctttaca
attgagtgtctcatcaaaatctttgctttgaggcaatactacttcaccattggctggaat
ttatttgattgtgtgatcgtggttctttctattgttagtacaatggtttctgccttggag
aaccaggagcatattcctttccctccaacactcttcaggattgtccggttggctcgcatt
ggtcgaatcctgagacttgttcgggcagcacgaggaataaggactctcctttttgctctg
atgatgtcccttccctctctattcaacatcggtcttctactttttctggttatgtttatt
tatgccatttttggtatgagctgcttttgcaaagtgaatgaggagtttggaattgatgac
atattcaacttcaaaacttttgttggcagcatactctgtctcttccagatcaccacctca
gcaggctgggatgccctccttaggcccatgctgcaatcaaaggattcatgcaaccccaat
ttagacagccgccacctccctgccatagccatcacctacttcgtcagttacatcatcatc
tcctttctcattgttgtcaacatgtacattgctgtgattttagagaacttcaacacagcc
acagaagaaagtgaggatcctttgggtgaagatgactttgagatattctatgaagtctgg
gaaaagtttgacccagaagcaacacagttcatcaaatattctgccctttctgactttgct
gatgcccttcctgaacctttgcgtgtggcaaagccaaataaatttcaatttctcatgatg
gacttgcccatggtgagtggagatcgtcttcactgcttggatattctcttcgcattcacc
acaagggtactcggtgactccagtggcctggacaacatgaaggtcatgatggaggagaag
ttcatggaagccaacccttccaagaagttatatgaacccatagtcaccaccaccaagagg
aaggaagaggaaaggtgtgctgctattattcaaaaggcctttcgaaaatataaggtgaag
atgtccacgtatgccttggaagataggcctggttcaccactccacacactctgcaatgga
gacctttctggctctggggtggccgagggcaaggtccactacgactga
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integrated database retrieval system
