Vulpes vulpes (red fox): 112921861 Help Entry 112921861         CDS       T05911                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism vvp  Vulpes vulpes (red fox) Brite KEGG Orthology (KO) [BR:vvp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:vvp03000]     112921861 (RC3H1)    04121 Ubiquitin system [BR:vvp04121]     112921861 (RC3H1) Transcription factors [BR:vvp03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     112921861 (RC3H1) Ubiquitin system [BR:vvp04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     112921861 (RC3H1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 FYVE zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  112921861 NCBI-ProteinID:  XP_025857049 LinkDB All DBs Position Unknown AA seq 1137 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE GAVDLPSRKTPALPNGIVSAGTTVTQLIPRGTDPTYDSSLKPGKIDHLSSSAPGSPPDLL ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA PPFEPAPYQQAPYQQGMYYTTPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQY GTQPQQYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQM EGYYPVAPHPTQIRPSYMRDPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPP FAPSPTLPPTFHQEEFMDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAV GSVEMMNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGP MQAMAPQGAPTKPINISDYTPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHG KPLPSAEREQLRLELQQLNHQISQQTQLRGLEAVSNRLLLQREVNTLAGQSQPPPPPPKW PGMISSEQLSLELHQVEREIGKRTRELSLENQCTLDMKSKLNTSKQAENGQPEPQNKVSA EDLTLTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRAGVTSTSAP NT seq 3414 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact ttcgatgaaacaattcgaaagcccatcagtttgggttgtggtcatactgtctgcaagatg tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagat attgagctcctccccgtgaactcagcattgctgcagctagtaggtgctcaggtccctgag cagcagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagctaag aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt ctgaatagcactacgcagagtgttctgagtcgcccaatgcagagaaagctggtgactctg gtccactgccaactagtggaagaagaaggcaggattcgtgctatgagagcagctcgatct ttaggtgaacggacagttacagagctcattcttcagcaccagaatccccagcagctctcc tccaatctctgggcagcagtcagggctaggggctgccagttccttggaccagcaatgcaa gaggaagctctaaagctggttctcctggccttggaagatggttctgctttgtcaagaaaa gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt gatgaagactcttctttgatgcaactgaaagaagagtttagaacctatgaagctctgcgg cgagaacatgactcccagatagtgcaaattgctatggaagcaggcttacgaattgcacca gaccaatggtcctctttgctttatggagaccagtctcataagtctcatatgcagtcaatt attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaattaacaattgct ctccagcgaactggagatccagcaaacttgaaccgactaagaccccatttggagctattg gcaaacattgaccctagtccagatgcccctcctcctacttgggaacagctggaaaatgga ctggttgctgtgcgtactgtggtacatgggctagtagactatatccagaaccatagcaaa aagggagcagatcaacagcagcccccacagcatagcaaatataaaacatacatgtgtcga gatatgaagcagagaggaggatgtcctcgtggggccagctgtacatttgcacactcacag gaggaactggagaagtttcgtaaaatgaacaaacgtctggttcccagaagacccctgagt gcctctttgggtcagcttaatgaggtgggcctgccttcagcagctgtccttccagatgaa ggtgcagtggatctgcctagcagaaaaacccctgctctgcccaatggaattgtatcagca gggactacagtaacacaactgattccacgagggacagatcccacctatgattccagtctg aagccaggaaagatagatcatctgagcagtagtgcccctggatcccctcctgacctgtta gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg gggccaacagacctgcctcctatgcctgtcaccaaaccacttcagatggtaccacgaggt tctcagttatatccagcgcaacaggcagatgtttattatcaggatcctcgaggagctgct ccaccatttgaaccagcaccttatcagcaggcaccttatcagcagggtatgtactatact acaccaccacagtgtgtatctcgctttgtcagacctccaccatctgctcctgaacctggt cctccctacttggatcattatccaccctatctccaagatcgtgtagtaaactctcagtat ggcacacagccacaacaatacccacctatgtacccaccacactatgatggccgccgagta taccctgctcagtcttatacaagagaggagattttccgagaaagtcctatacccattgag attccacctgcagcagtgccatcctatgtaccagaatccagagaaagataccaacagatg gagggttactatccagtggctcctcatccaactcagatcagaccttcgtacatgagagac cctccttatagccggcttcctcctcctcctcagccccatcctagcctagatgagctacat cgcagacgaaaggaaataatggcccagctagaggaaaggaaggttatctctccacctcct tttgcaccttcaccaacattgcctcctacctttcatcaagaggaatttatggatgaagac ctgaaggtagctgggaaatacaaaggaaatgactacagccagtattctccctggtcatgt gacaccatcggctcctacattggaaccaaagatgccaaacccaaagatgtggtggcagtg gggagtgtggaaatgatgaatgtggagagtaaaggaatgagagaccagagactggatctt cagagaagagcagcagaaaccagtgatgatgaccttatcccatttggagaccgaccaacc gtatctcggtttggtgccatctctcgaacttctaaaacaatatatcagggtgctggtcca atgcaggctatggcacctcagggagctcccacaaaacctattaatatttcagactatact ccatatggaacccatggcggctggggaggttctccatattcacctcatcagaacatacct tctcagggacacttcagtgagagggagagaatatccatgtcagaagtggccagtcatgga aagccccttccatctgctgagagggaacagctacgactagaattacaacagctaaaccac caaattagccaacagactcagctacgtggactagaggctgttagtaacaggctgctgttg cagagggaggtcaacaccctggcaggccagtcacagcccccaccaccacctccaaaatgg cctgggatgatttcaagtgagcaattgagtttggaactgcaccaggtggaaagggaaatc gggaagagaacccgggaactgagtctggagaaccagtgtactctggacatgaaaagcaaa ttgaatacaagtaaacaagcagaaaatggacaaccagaaccacaaaataaggtttcagct gaggaccttacattgacattcagtgatgtaccaaatggctcagctttgacacaagagaat atcagcctcctgtcaaacaagaccagctctctgaacctgtcagaggatcccgagggagga ggtgacaacaatgactcccagagagctggagtcacatccacttctgctccctaa

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