Vulpes vulpes (red fox): 112922388
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Entry
112922388 CDS
T05911
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03082
ATP-dependent chromatin remodeling
vvp04714
Thermogenesis
vvp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112922388 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112922388 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112922388 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvp03021
]
112922388 (SMARCC2)
03036 Chromosome and associated proteins [BR:
vvp03036
]
112922388 (SMARCC2)
Transcription machinery [BR:
vvp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112922388 (SMARCC2)
Chromosome and associated proteins [BR:
vvp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112922388 (SMARCC2)
PBAF complex
112922388 (SMARCC2)
GBAF(ncBAF) complex
112922388 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
112922388
NCBI-ProteinID:
XP_025857742
UniProt:
A0A3Q7T9V9
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASH
VVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRK
VHAKWILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNY
KKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVT
LPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSMGNKGEQTKNPDLHEDN
VTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLN
PQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLAD
TPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKG
KEKPADMQNFGLRTDMYTRKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSE
HVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVD
PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTS
DEPERIEESGTDEARAEGQATEEKKEPKEAREGGGATEEETKEKTSEVPKKDEERGKQGD
SEKESEKSDGDPIVDPDKEKEPKEGQEEVLKDMVESEGERKTKVERDIGEGNLSTAAAAA
LAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQ
QLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPTGTAGPPTVHS
LAMAPASVAPAPAGSGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPPGVPPPGP
HGPSPFPNQQTPPAMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPD
PTAPSPGTVTPVPPPQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaacgtggaaatgttcatgaccattgagaagtccttggttcagaataactgc
ctgtctcgacctaacatttttctctgcccggaaattgaacccaaactgctagggaaatta
aaggacattatcaagagacaccagggaacagtcactgaggataagaacaatgcctcccat
gttgtgtatcctgtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaag
cgggataagcaggttcttctgcactggggctactaccctgacagttatgacacgtggatc
ccagccagtgaaattgaagcatctgtggaagatgctccaactcctgagaaacctaggaag
gttcatgcaaagtggattctggacacagacactttcaatgaatggatgaatgaggaagac
tatgaagtaaatgatgataaaagccctgtctcccgccgaaagaagatttcagccaagact
ctgacggatgaggtgaacagcccagattcagatcgacgggacaagaaggggggcaactat
aaaaagaggaagcgctccccctctccttcaccaaccccagaagctaagaagaaaaatgcc
aagaaaggtccctcaacaccttacaccaagtcaaagcgtgggcacagagaggaggagcaa
gaagacctgacaaaggacatggatgagccttcaccagtccccaatgtagaggaggtgacg
ttacctaagacagtcaacactaagaaggattcagagtccgccccggtcaaaggaggcacc
atgactgacctggatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggat
gaaaacagtatggggaataagggggagcagacgaagaatccggacctgcacgaggacaac
gtaactgaacagacccaccacatcatcattcccagctacgctgcctggtttgactataat
agtgttcatgccattgagcggagggctctccctgagttctttaacggcaagaacaagtcc
aagaccccggaaatctacctggcttatcgaaacttcatgattgacacttaccggctgaac
ccccaagaatatctcacctccactgcctgccgtaggaacctggctggtgatgtctgtgcc
atcatgagggtccatgccttcctagagcagtggggtctcattaactaccaggtggatgct
gagagtcgaccgaccccgatggggcctccgcccacctctcacttccatgtcttggcagac
acaccgtcggggctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgct
gataccaaggctgggcgaaagggcaaagagctggatgacctggtgccagagacggctaag
ggcaagccagagctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggc
aaagagaagccagcagacatgcagaactttgggctgcgcacagacatgtacacaaggaag
aacgtcccctccaagagcaaagctgcagccagtgccactcgagagtggacggagcaagag
accctgctactcctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagag
cacgtgggaagccgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaa
gacccgtacctggaggactcggaggcctccctgggccccctggcctaccagcctatcccc
ttcagtcagtcaggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgat
cctcgagtcgcctctgctgctgcgaagtcggccctagaagagttctccaagatgaaggaa
gaagtacccacagccttggtggaggcccatgttcggaaagtggaagaagccgccaaagtg
acaggcaaggccgacccagccttcggtctggagagcagtgggatcgcagggaccacctcc
gatgagcccgagcggatcgaggagagcgggactgatgaggcacgggcggagggccaggcc
acagaggagaagaaggagcccaaggaagcccgagaaggaggtggggctactgaagaagaa
acaaaggagaagaccagcgaggtccccaagaaggatgaagagagagggaaacaaggtgac
agtgaaaaggagtcagagaagagtgatggggaccccatagttgaccctgacaaggagaag
gaaccaaaggaagggcaagaggaagtgctgaaggacatggtggagtcagagggggagagg
aagacgaaggtggagcgggacatcggcgagggcaacctctccactgccgcagccgccgcc
ctggccgccgccgcagtgaaggccaagcacctggccgccgtggaggagaggaagatcaaa
tcgctggtggccctgctggtggagacccagatgaaaaagttggagatcaaactccggcac
tttgaagagttggagacgatcatggaccgggagcgagaggcactggagtatcagaggcag
cagctcctggcagatagacaagccttccacatggagcagctgaagtatgccgagatgagg
gcccggcagcaacacttccagcaaatgcaccaacagcagcagcagccaccgccagctctg
cccccgggctcccagcctgtcccacccaccggcactgctgggccgcccacggttcacagc
ctggccatggctccggcctccgtggcccccgctcctgctggcagtggggccccccccgga
agcttgggcccctctgaacagattgggcaggcagggtcagccgcggggccacagcagcag
caaccagctggagccccccagcctggggcagtcccaccaggggttcccccccctggaccc
catggcccctcaccgttccccaaccaacaaactcctcccgcaatgatgccaggggcagtg
ccaggcagcgggcacccaggcgtggcggcccagagccctgccattgtggcagctgttcag
ggcaacctcctgcccagtgccagcccactgccagacccaggtacccctctgcctccagac
cccacggccccgagcccaggcacagtcacccctgtgccacctccacagtga
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