KEGG   Vulpes vulpes (red fox): 112922388
Entry
112922388         CDS       T05911                                 
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03082  ATP-dependent chromatin remodeling
vvp04714  Thermogenesis
vvp05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112922388 (SMARCC2)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    112922388 (SMARCC2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    112922388 (SMARCC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvp03021]
    112922388 (SMARCC2)
   03036 Chromosome and associated proteins [BR:vvp03036]
    112922388 (SMARCC2)
Transcription machinery [BR:vvp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     112922388 (SMARCC2)
Chromosome and associated proteins [BR:vvp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    112922388 (SMARCC2)
   PBAF complex
    112922388 (SMARCC2)
   GBAF(ncBAF) complex
    112922388 (SMARCC2)
SSDB
Motif
Pfam: SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 SWIRM-assoc_2 Chromo CD99L2
Other DBs
NCBI-GeneID: 112922388
NCBI-ProteinID: XP_025857742
UniProt: A0A3Q7T9V9
LinkDB
Position
Unknown
AA seq 1036 aa
MDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASH
VVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRK
VHAKWILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNY
KKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVT
LPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSMGNKGEQTKNPDLHEDN
VTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLN
PQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLAD
TPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKG
KEKPADMQNFGLRTDMYTRKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSE
HVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVD
PRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTS
DEPERIEESGTDEARAEGQATEEKKEPKEAREGGGATEEETKEKTSEVPKKDEERGKQGD
SEKESEKSDGDPIVDPDKEKEPKEGQEEVLKDMVESEGERKTKVERDIGEGNLSTAAAAA
LAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQ
QLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPTGTAGPPTVHS
LAMAPASVAPAPAGSGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPPGVPPPGP
HGPSPFPNQQTPPAMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPD
PTAPSPGTVTPVPPPQ
NT seq 3111 nt   +upstreamnt  +downstreamnt
atggaccgcaacgtggaaatgttcatgaccattgagaagtccttggttcagaataactgc
ctgtctcgacctaacatttttctctgcccggaaattgaacccaaactgctagggaaatta
aaggacattatcaagagacaccagggaacagtcactgaggataagaacaatgcctcccat
gttgtgtatcctgtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaag
cgggataagcaggttcttctgcactggggctactaccctgacagttatgacacgtggatc
ccagccagtgaaattgaagcatctgtggaagatgctccaactcctgagaaacctaggaag
gttcatgcaaagtggattctggacacagacactttcaatgaatggatgaatgaggaagac
tatgaagtaaatgatgataaaagccctgtctcccgccgaaagaagatttcagccaagact
ctgacggatgaggtgaacagcccagattcagatcgacgggacaagaaggggggcaactat
aaaaagaggaagcgctccccctctccttcaccaaccccagaagctaagaagaaaaatgcc
aagaaaggtccctcaacaccttacaccaagtcaaagcgtgggcacagagaggaggagcaa
gaagacctgacaaaggacatggatgagccttcaccagtccccaatgtagaggaggtgacg
ttacctaagacagtcaacactaagaaggattcagagtccgccccggtcaaaggaggcacc
atgactgacctggatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggat
gaaaacagtatggggaataagggggagcagacgaagaatccggacctgcacgaggacaac
gtaactgaacagacccaccacatcatcattcccagctacgctgcctggtttgactataat
agtgttcatgccattgagcggagggctctccctgagttctttaacggcaagaacaagtcc
aagaccccggaaatctacctggcttatcgaaacttcatgattgacacttaccggctgaac
ccccaagaatatctcacctccactgcctgccgtaggaacctggctggtgatgtctgtgcc
atcatgagggtccatgccttcctagagcagtggggtctcattaactaccaggtggatgct
gagagtcgaccgaccccgatggggcctccgcccacctctcacttccatgtcttggcagac
acaccgtcggggctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgct
gataccaaggctgggcgaaagggcaaagagctggatgacctggtgccagagacggctaag
ggcaagccagagctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggc
aaagagaagccagcagacatgcagaactttgggctgcgcacagacatgtacacaaggaag
aacgtcccctccaagagcaaagctgcagccagtgccactcgagagtggacggagcaagag
accctgctactcctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagag
cacgtgggaagccgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaa
gacccgtacctggaggactcggaggcctccctgggccccctggcctaccagcctatcccc
ttcagtcagtcaggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgat
cctcgagtcgcctctgctgctgcgaagtcggccctagaagagttctccaagatgaaggaa
gaagtacccacagccttggtggaggcccatgttcggaaagtggaagaagccgccaaagtg
acaggcaaggccgacccagccttcggtctggagagcagtgggatcgcagggaccacctcc
gatgagcccgagcggatcgaggagagcgggactgatgaggcacgggcggagggccaggcc
acagaggagaagaaggagcccaaggaagcccgagaaggaggtggggctactgaagaagaa
acaaaggagaagaccagcgaggtccccaagaaggatgaagagagagggaaacaaggtgac
agtgaaaaggagtcagagaagagtgatggggaccccatagttgaccctgacaaggagaag
gaaccaaaggaagggcaagaggaagtgctgaaggacatggtggagtcagagggggagagg
aagacgaaggtggagcgggacatcggcgagggcaacctctccactgccgcagccgccgcc
ctggccgccgccgcagtgaaggccaagcacctggccgccgtggaggagaggaagatcaaa
tcgctggtggccctgctggtggagacccagatgaaaaagttggagatcaaactccggcac
tttgaagagttggagacgatcatggaccgggagcgagaggcactggagtatcagaggcag
cagctcctggcagatagacaagccttccacatggagcagctgaagtatgccgagatgagg
gcccggcagcaacacttccagcaaatgcaccaacagcagcagcagccaccgccagctctg
cccccgggctcccagcctgtcccacccaccggcactgctgggccgcccacggttcacagc
ctggccatggctccggcctccgtggcccccgctcctgctggcagtggggccccccccgga
agcttgggcccctctgaacagattgggcaggcagggtcagccgcggggccacagcagcag
caaccagctggagccccccagcctggggcagtcccaccaggggttcccccccctggaccc
catggcccctcaccgttccccaaccaacaaactcctcccgcaatgatgccaggggcagtg
ccaggcagcgggcacccaggcgtggcggcccagagccctgccattgtggcagctgttcag
ggcaacctcctgcccagtgccagcccactgccagacccaggtacccctctgcctccagac
cccacggccccgagcccaggcacagtcacccctgtgccacctccacagtga

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