Vulpes vulpes (red fox): 112922672
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Entry
112922672 CDS
T05911
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp05016
Huntington disease
vvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
112922672 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
112922672 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112922672 (HTT)
04131 Membrane trafficking [BR:
vvp04131
]
112922672 (HTT)
03029 Mitochondrial biogenesis [BR:
vvp03029
]
112922672 (HTT)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112922672 (HTT)
Membrane trafficking [BR:
vvp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112922672 (HTT)
Mitochondrial biogenesis [BR:
vvp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112922672 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
112922672
NCBI-ProteinID:
XP_025858091
LinkDB
All DBs
Position
Unknown
AA seq
3102 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQPPPPPPPQPPQPLPQAQPKKELSATKKDRVNHCL
TICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNRVIKALMDSNLP
RLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESV
QETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRT
QYFYSWLLNVLLGLLVPVEGEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKE
LEVSPSTEQLIQVYELTLHYTQHQDHNAVTGALELLQQLFRTPPPELLQALSTPGGGLLN
ATQQQPGCRSRSSSIVELLAGGGSSCSPVLSRKQKGKVLFGEAAALDDDSESRSEGSSPA
FTASVKGEIGGELAASSGVSTPGSASSATDSVGHDIITEQPRSQHTLQPDSVDLTSCDLA
SAATDGDEEDILSHSSSQISAVPSDPAMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDS
SEIVLDGADSQYSGMQIGQPQDEDEEAAGILPDEDADAFRTSSVALQQAHLLKSMGHSRQ
PSDSSIDKFVSRDEVTEPGDQENKPCRIKGDIGQSTDDDSVPLVHCVRLLCASFLLTGEK
NVLVPDRDVRVSVKALALSCVGAAVALHPESFFSKLYKVPLDTMEYPEEQYVSDILNYID
HGDPQVRGATAVLCGTLISSILSRSRFQVGDWMGTVRTLTGSTFSLADCVPLLQKTLKDE
SSVTCKLACTAVRHCVMSLCSSSYSELGLQLITNVLTLRDSSYWLVRTELLETLAEIDFR
LVSFLETKAENLHRGTHHYTGLLKLQERVLHDVVIYLLGDEDPRVRHVAAAALMRLVPKL
FYKCDQGQADPVVAVARDQSSVYLKLLMHEAQPPSHFSVSTITRIYRGYNLLPSMTDVTV
ENNLSRVIAAVSRELVTSTTRALTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSTSDES
RKSCTVGMATMILTLLSSAWFPLDLSAHQDALVLAGNLLAASAPKSLRSSWTSEEEANPA
ASKQEEVWPALGDRTLVPMVEQLFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSL
SPIRRKGKEKEPGEPASVPLSPKKGSEASPASRQSDAPGPVTANKSSSLGSFCHLPSYLK
LHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLK
SCFSREPVMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYC
FMAPYTHFTQALADASLRTMVQTEQDYGTSGWFDVLQKVSTQLKTNLTSATKNRADKNAI
HNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQ
FEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHA
IPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKE
NEDKWKRLSRQIADVILPMLAKQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFV
TPDTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCPIINRLRDGD
STSIPEEHHEGKQMKTLPEETFSRFLLQLVGILLEDIVTKQLKIEMSEQQHTFYCQELGT
LLMCLIHIFKSGMFRRITAAASRLFTVDSTDGSFYGLERLNARVRAMVPTHPALVLLWCQ
ILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLSPQMSGEEEDPDAACKLGMCNREIVRRGA
LILFCDYVCQNLHDSEHLTWLIVNHIQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQ
SRCENLSTPTTLKKTLQCLEGIHFSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEM
LLAANLQSGMAQLPVEEVSRVQEYLQRSGLAQRHQRLYSLLDRLRLATAPGSRGPSPPVT
SHPLDGDGPLALEIVIPDKDWYLRLVKSQCWTRSDSALLEGAELVNRIPPSDMSTFMMNS
EFNLSLLAPCLGLGMREISGGQRSPLFEAARLVTLDRVTSLVQQLPAVHHVFQPFLPMEP
TAYWSKLNDLFGDAVLYRSLTTLARALAQYLLVFSKLPSHLHLPPEKERDTVKFVVMTLE
ALAWHLIHEQIPLSLDLQAGLDCCCLALQLPSLWSVLSSPEMVTHACSLIHCVRFILEAV
VVQPGDQLLSPERRVNMPKAARVDEVDPNTQNLAYITTACQMVAEMVESLPSVLALGHKR
NSNTPAFLTSVLRNIVISLARLPLVNSYTRVPPLVWKLGWSPEPGGDFGTAFPEIPVEFL
QEKEVFKEFIYRINALGWTSRTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINV
LAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQA
MVSKRENIATHHLYQAWDPVPSLSPATTGALISHDKLLLQINPERELGNMSYKLGQVSIH
SVWLGNSITPLREEEWEEEEEEEADVPAPASPPTSPINSRKHRAGVDIHSCSQFLLELYS
RWILPSGSARRTPIILISEVVRSLLVVSDLFTERTQFEMMYLTLTELRRVHPAEDEILIQ
YLVPATCKAAAVLGMDKAVAEPVSRLLETTLRSSHLPSKVGALHGALYVLECDLLDETAK
QLVPVISDYLLSNLKGAAHCVNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCG
VMLSGSEESTPSIIYHCVLRGLERLLLSEQLCRLDAESLVKLSVDRVNVHSPHRAMAALG
LMLTCMYTGKEKISPGRTSDPSPTAPDSESVIVAMERVSVLFDRVRKGFPCEARVVARIL
PQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSL
SNFTQRTPVAMAVWSLSCFFVSASTSPWVSAVLPHVISRMGKLEQVDVNLFCLVATDFYR
HQIEEELDRRAFQSVFEVVAAPGNPYHRLLTCLRNVHKVTTC
NT seq
9309 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaagtccttccagcagcag
cagcaacagcagcagcagcctccgccgccgccacctcctcagcctcctcagccgctgccg
caggcgcagccaaagaaagaactctcagctaccaagaaggaccgcgtcaatcattgtctg
acaatatgtgaaaacatagtggcacagtcactcagaaattctccagaatttcagaaactt
ctgggcatcgctatggaactttttctgctgtgcagtgatgatgcagagtcggatgtccgg
atggtggctgacgagtgcctcaacagagtcataaaagccctgatggactctaatcttccg
aggttacagttagaactctataaagaaatcaaaaagaacggtgctccccggagcctgcgc
gctgccctgtggaggtttgctgagctggctcacctggttcggcctcagaaatgcaggcct
tacttggtaaaccttttgccttgcctgactcgaataagcaagagacctgaggaatctgtt
caggagaccttggctgcagctgtacccaaaattatggcttcttttggcaattttgcaaat
gacaatgaaattaaggttctattaaaggctttcatagcgaatctgaagtcaagctccccg
accattcgacggacagcagctggctcagcagtgagcatctgccagcactcaagaaggaca
cagtatttttacagctggctactaaatgtgcttttaggtttgctggtccctgttgagggt
gaacactctaccctcctgattcttggagtgctgctcacactgaggtatctggtgccttta
ctgcagcagcaggttaaggacacgagcctgaaaggcagctttggagtgacacggaaagaa
ctggaagtctctccctcaacagagcagctcatccaggtttatgaactgaccttgcattat
actcagcaccaagaccacaacgctgtgactggagcgctggagctcctgcagcagctattc
cgcacgcccccgcccgagctcctgcaggctctgagcacacccggtggcgggctgctcaat
gccacgcagcagcagcctgggtgccggagccgcagcagcagcatcgtggagctcctagct
ggagggggttcttcatgcagccctgtcctttcaagaaaacaaaaagggaaagtgctcttc
ggagaagcggcagccttggatgatgactccgagtccaggtcggagggcagcagccccgcc
ttcacagcctcggtcaagggtgagattggtggtgagctggctgcctcttccggggtctct
actcctggctctgccagttcagccaccgactccgtggggcatgacatcatcaccgagcag
ccccggtcacagcacacactgcagccagactcagtggatctgaccagctgtgacctggcg
agtgctgccaccgatggggatgaggaggacatcttgagccacagctccagccagatcagt
gctgtcccgtcggatccagccatggacctgaacgatggcacccaggcctcctccccggtc
agcgacagctcccagaccaccactgaagggccggattcagctgtgaccccctcagacagt
tctgaaattgtgttagatggtgctgacagccagtattcggggatgcagattggacagcca
caggacgaggatgaggaagccgcaggcattcttccagatgaggatgcagatgctttcaga
acctcttcagttgcccttcagcaagcacatttattgaaaagcatgggccacagcagacag
ccctctgacagcagtatagacaaatttgtctccagagatgaagttaccgaaccaggagat
caagaaaacaagccttgccggatcaaaggtgacataggacagtctaccgatgatgattct
gttcctcttgtccattgtgtccgcctcctgtgtgcatcatttttgctgactggggaaaaa
aatgttttggttccagacagggacgtgcgggtcagtgtgaaggcactggcactcagctgt
gttggagctgctgtggcccttcatcctgaatctttcttcagcaaactttataaagtacct
cttgacaccatggaataccctgaggagcagtatgtgtcagacatcctgaactacatcgac
cacggagacccccaagtcagaggagccacggccgttctctgcggaaccctcatctcctct
atcctcagcagatcccgcttccaggtgggagattggatgggcaccgtcaggaccctgaca
ggaagtacattttctctggcggactgtgttcctttgctgcagaaaactttgaaggatgaa
tcttctgttacttgcaagttggcttgtacagctgtgaggcactgtgtcatgagtctctgc
agcagtagctatagtgaattgggattacagctgatcaccaacgtgctgaccctgagggat
agttcctactggttggtgaggacagagctcttggaaactcttgcagagattgactttcgg
ttggtgagctttttggagacaaaagcagaaaacctgcacagagggactcatcattacaca
gggctcttaaaactacaagaacgagtgctccatgatgttgtcatctatctgcttggggat
gaggaccccagagtgcggcatgttgctgcagcggcattaatgaggcttgtcccaaagctg
ttttataagtgcgaccaaggacaagctgaccccgtggtggctgtggcgcgagatcaaagc
agtgtttacctgaagctcctcatgcacgaggcgcagcctccatctcacttctccgtcagc
accataaccagaatctacagaggctataacttactaccgagcatgacagacgtcactgtg
gaaaacaacctctccagagtcattgcagcagtttcccgcgaattggtcacgtcaaccaca
cgcgcgctcacatttggatgctgcgaagctctgtgtctcctttcaactgcctttcctgtc
tgcatttggagtttaggttggcattgtggggtgcctccactaagcacctcagatgagtct
agaaagagctgtactgttggcatggccacgatgatcctcaccttgctctcatctgcttgg
ttcccactggatctctctgcccatcaggatgctttggttttagccggaaacttacttgca
gccagtgcccccaaatctctgagaagttcatggacctctgaagaggaggccaacccagca
gcctccaagcaggaagaggtctggccagctttaggtgaccggaccctggtgcccatggtg
gagcagctcttctcccacttgctgaaggtgattaacatctgtgctcacgtcttggacgat
gtggctcccggaccagcaataaaggcagccttgccgtctctgacaaaccctccttcccta
agtcccatccgacggaagggaaaggagaaagaacctggagagccagcctctgtgcccttg
agccccaagaaaggcagcgaagccagtccagcctctcgacaatctgatgccccaggacct
gttacagcaaataagtcctcgtcattggggagtttctgtcaccttccttcatatctcaaa
ttgcacgatgtcctgaaagctactcacgccaactataaggttaccttggatcttcagaac
agcactgaaaagtttgggggctttctgcgctctgccttggatgttctctctcagatcctg
gagctggccacgctgcaggacatcggaaagtgtgtggaggagatcctagggtatctgaaa
tcctgtttcagtcgagaaccagtgatggcaactgtttgtgttcaacagttgttgaagact
ctctttgggacaaacttggcctcccagtttgatggcttatcttccaaccccagcaagtct
caaggccgagcacagcgtctgggctcgtccagcgtgaggccaggcttgtatcattactgt
ttcatggctccatacacccacttcacccaggccttagccgatgccagcttgaggaccatg
gtgcagacggagcaggactacggcacctcagggtggtttgatgtgcttcagaaggtgtct
acgcagttgaagaccaacctcacgagtgccactaagaaccgtgcagataagaatgctatt
cataatcacatacgtttgttcgagcctctggttataaaagctttaaaacagtacacaacc
acaacgtctgtgcagctgcagaggcaggttttagacttgctggcacagctggttcagtta
cgggtcaattactgtcttctggactccgatcaggtgtttattggatttgtgctgaagcag
tttgagtacattgaagtaggccagttcagggaatcagaggcaattattccaaacatcttt
ttcttcctggtattactatcttatgaacgctatcattcaaaacagatcattggaattcct
aaaatcattcagctctgtgatggcatcatggccagtgggaggaaggctgtgacacatgcc
ataccggccctgcagcccatagtccatgatctctttgtactgagaggaaccaataaagcc
gatgcaggaaaagagcttgaaacccaaaaagaggtggtggtgtcaatgttactgagactc
atccagtaccatcaggtgctggagatgttcatcctggtcctacagcagtgccacaaggag
aatgaagataagtggaagcgactgtctcggcagatagcagatgtcatcctcccgatgtta
gccaagcagcagatgcacattgattctcatgaagcccttggagtgttaaatactttattt
gagatcctggctccttcttccctccgtcctgtggacatgcttttacgaagtatgttcgtc
actccagatacaatggcatctgtgagcactgtccaactgtggatatcaggaatcctagcc
attttgagagttctaatttcccagtcaactgaagatattgttctttctcgtattcaggag
ctctccttctccccatatttaatttcctgtccaataattaataggttaagagatggggat
agtacttcaataccagaagaacaccatgaagggaaacaaatgaagactttgccagaggaa
acattttcaaggtttctcctacaactagttggcattcttttggaggatattgttacaaaa
cagctaaaaatagaaatgagtgaacagcaacatactttctattgtcaagaactaggcacc
ctgctcatgtgtctgatccacatcttcaagtctggaatgttccggagaatcacagcagct
gcctctagactcttcacggtagacagcaccgacggcagtttctatggcctagagaggctg
aacgcccgggtgcgtgccatggtgcccacacatccagccctcgtgctgctctggtgccag
atcctgctgcttgttagccacaccgactaccgctggtgggcagaggtacagcagaccccc
aggagacgcagtctgtccagtaccaagtcactcagcccccagatgtctggagaagaggag
gatcctgatgcagcatgcaagcttgggatgtgcaatagagaaatagtacgaaggggagct
ctcattctcttctgcgattatgtctgtcagaacctacacgattcagagcacctaacgtgg
ctcatcgtgaatcatatccaggacctgatcaatctgtcccatgagcctcccgtgcaggat
tttattagtgctgttcatcggaactctgctgccagtggccttttcatccaggcaattcag
tctcgttgtgaaaatctttccacccctaccactctgaagaagacgcttcagtgcttggaa
gggatccacttcagccagtcgggtgccgtgttaaccctatatgtggacaagcttttgtgc
actccgttccgtgtgctggctcgcatggtcgacactctagcctgtcgccgggtggaaatg
cttctggctgcaaatttacagagtggcatggcccagctgccagtggaggaagtgagcaga
gtccaggagtacctgcagcgtagcgggctggcccagagacaccaaaggctctactccctg
ctggacaggctgcgtcttgccactgcaccgggctcacgtggcccttcacctccagttacc
tcccacccgctggacggggatgggcccctggcactagagatagtgattccagataaagac
tggtacctacgtctagtcaaatcccagtgctggactaggtcagattctgcgctgctggaa
ggggcagaactggtgaatcggattcctcccagtgacatgagtacattcatgatgaactcg
gaattcaacttaagtctgttggctccatgcctgggcctgggcatgcgcgaaatctccgga
ggccagaggagtcccctttttgaagcagctcgcctggtgacactggaccgcgtgaccagc
ctggtccagcagctccctgctgtccatcatgtgttccagccattcctgcctatggagccc
actgcctactggagcaagttgaacgatctatttggggatgccgtgttgtatcggtccttg
accactctggcccgggccctagcccaatacctgctggtgttctccaaactgcccagccat
ttgcacctacctcctgagaaggagagggacactgtgaagtttgtggtcatgacccttgag
gccctggcatggcatttgatccatgagcagatcccactgagtctggaccttcaggcaggc
ctcgactgctgttgcctggctctgcagctgcccagcctctggagtgtgctctcctcccca
gagatggtgacccacgcctgctctctcattcactgtgtccgcttcatcctagaagccgtc
gtggtgcagcctggggaccagctgcttagcccagaaaggagggtgaacatgccaaaggcc
gccagagtggacgaagtagatccaaacacacaaaatctagcatatatcaccacagcctgt
cagatggtggcagaaatggtggagtctttgccatcagtgttggccttggggcacaagagg
aacagcaacaccccagcgtttctcacgtcagtgctgaggaacatcgtcatcagcctggct
cgcttacccctcgtcaatagctacacgcgtgtccccccgctggtttggaaactcggatgg
tcgcctgagccaggaggggactttggcacagccttccccgagatcccagtggagttcctc
caggagaaggaagtctttaaagagttcatctaccgcatcaatgcactaggatggaccagc
cgcacccagtttgaggaaacgtgggccaccctccttggtgtcctggtgactcagcccctt
gtgatggagcaggaagagagcccaccggaagaagacacagagaggacccagatcaacgtc
ctggctgtgcaggccatcacctccctggtgctgagtgcaatgactgtgcctgtggctggc
aacccagctgtgagctgcttggagcagcagccccggaacaagcccttgaaagccctcgac
accaggtttgggaggaagttgagcattatccgaggaattgtagagcaggagatccaagca
atggtttcaaagagagagaatatcgccacgcatcacttataccaagcgtgggaccctgtc
ccttctctgtctccagctactacaggtgccctcataagccacgacaagcttctgctgcag
atcaaccccgagcgggagctgggaaacatgagctataagcttggccaggtgtccattcac
tccgtgtggctggggaacagcatcacacccttgagagaggaggagtgggaggaggaggaa
gaagaggaggctgatgtccctgcacctgcatcaccacccacatcacccatcaactccagg
aagcaccgggctggagtcgacattcactcctgttcccagtttttgcttgaattgtacagt
cgctggatcctgccgtcaggttcggccagaaggacacccatcatcctgatcagtgaagtg
gttcgatctctcctcgtggtctcagacttattcactgagcgcacccagtttgagatgatg
tatctgacgctgacggaactgcggagggtgcaccctgcagaagacgagattctcattcag
tacctggtgcccgccacctgcaaggcagctgccgtccttggaatggacaaggccgtggca
gagccagtcagccggctgctagagaccacgctgaggagcagccaccttcccagcaaggtc
ggagccctgcacggcgctctctacgtgctggagtgtgacctcctggatgagacggcgaag
cagctcgtcccagtaatcagcgactacctcttgtccaacctcaaaggggcggcccactgt
gtgaacattcatagccagcagcacgtgctggtgatgtgcgccactgccttttacctgatc
gagaactaccccctggatgtaggcccggaattctctgcatcaataatacagatgtgtggg
gtgatgctgtctggaagtgaggagtccaccccgtctatcatctaccactgtgtcctgcgg
ggtctggagcgcctcctgctctctgaacaactctgccggctagatgcagagtccctggtc
aagcttagtgtggacagagtgaacgtgcacagcccacatcgggccatggctgccctgggc
ctgatgcttacctgcatgtacacagggaaggagaaaatcagcccgggcagaacctcagac
cccagccccaccgccccagacagcgagtcagtgattgtggctatggagcgtgtgtctgta
ctttttgacagggtcaggaaagggttcccctgtgaagccagagtggtggcacggatcctt
cctcagtttttagatgacttcttcccaccccaggacgtcatgaacaaagtcattggagaa
tttctgtccaaccagcagccgtacccgcagttcatggccacagttgtatataaggttttc
cagactctgcacagcaccgggcagtcgtccatggtccgagactgggtcatgctgtccttg
tccaacttcacacaaaggacgccagtggccatggccgtgtggagcctctcctgcttcttt
gtcagtgcttccaccagcccgtgggtctcggcggtccttccccacgttatcagcaggatg
ggcaagctggaacaagtggacgttaacctcttctgcctggtggccacggacttttacaga
caccagatagaggaggagctggaccgccgggccttccagtctgtgttcgaggtggtcgcg
gcaccaggaaacccgtatcatcgattgctgacttgtttgcggaatgtccacaaagtcacc
acgtgctga
DBGET
integrated database retrieval system
