Vulpes vulpes (red fox): 112922973
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Entry
112922973 CDS
T05911
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp02010
ABC transporters
vvp04148
Efferocytosis
vvp04975
Fat digestion and absorption
vvp04979
Cholesterol metabolism
vvp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112922973 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112922973 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
112922973 (ABCA1)
04979 Cholesterol metabolism
112922973 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112922973 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vvp02000
]
112922973 (ABCA1)
Transporters [BR:
vvp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
112922973 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
112922973
NCBI-ProteinID:
XP_025858463
LinkDB
All DBs
Position
Unknown
AA seq
2267 aa
AA seq
DB search
MASWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDIHEVLRTLQQVESFSSSLKLQDFLVDNEAFSGFLTHNLSLPRLTVDKMLGANVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGEQEVSMLCSLPKEKLDAAEQVLHSSMDILKPIL
WTEGPLTGETVLPAFARKQKGEDGWMSFQELENPSVLLFSMNSWSDMRQEVMFLTNVNSS
SSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDAGSFYDNSTTPY
CNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDMQG
MWEELSPKIWTFMESNPEMDLVRTLLDSRSNDHFWEQRLDGLDWTAKDILAFLAKHPEDV
QSANGSVYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWA
GIVFTGITPGSIELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFA
YLQDVVEQAIIRVLTGTERKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAV
IIKGIVYEKEARLKETMRIMGLDSGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSD
PSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFT
LKLFVSLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDTFL
YGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGVSEICMEEEPTH
LKLGVSIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRFEMNTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ
MALDVGLPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWEL
LLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKD
VESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEA
RLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE
SGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDVDPESRETDLLSGMDGK
GSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKY
PSLELQPWMYNEQYTFVSNDAPEDMSTQELLNALTRDPGFGTRCMEGNPIPDVPCSVGEE
EWTTAPVPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTA
DILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNA
IKQVKKHLKLAKDSSADRFLSNLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAIL
RANLQKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVV
FLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTN
LPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNN
KLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLF
AMAVEGVVFFLITVLIQYRFFIRPRPIKAKLPPLNDEDEDVKRERQRILDGGGQNDILEI
KELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNK
NSILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGL
VKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEG
RSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSSPDLKP
VQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLD
QVFVNFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctggcctcagctgcgcctgctgctgtggaagaacctcaccttcagaagaagg
caaacatgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tccgtgcggctcagctacccgccctatgagcaacatgagtgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttggattcaggggattatctgtaatgccaataacccc
tgcttccgctatccgactcctggtgaggcccctggggtggttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggctccttttatatagccagaaagacacc
agcatgaaggacatacacgaggttctgaggacgttacagcaggttgagagtttcagttca
agcttgaaacttcaggatttcctagtggacaatgaagccttctctggattcttgacacac
aacctttctctgccaaggctcactgtggacaaaatgctgggggctaatgtcagcctccac
aaggtatttttgcaaggctaccagttacatttgacgaatctgtgcagtggatcgaagtta
gaagaggtgattcaacttggtgaacaagaagtttccatgctttgcagcttgccaaaggag
aagctggatgcagcagagcaagtgcttcattccagcatggacatcctgaagccgatcctg
tggacggagggccccttgacaggagaaacagttcttccagcgttcgccaggaaacagaag
ggggaggatggatggatgtcttttcaagaactagaaaacccttcagttttgctgttcagc
atgaacagctggagcgacatgcgccaggaggtaatgttcctgaccaacgtgaacagctcc
agctcctccacccagatctaccaagctgtgtcccgcatcgtctgtggccaccccgagggg
gggggcctcaagatcaagtccctcaactggtacgaggacaacaactacaaagccctcttt
ggtggcaacggcacggacgaagatgctggcagcttctatgacaattctacgactccttat
tgcaatgatctgatgaagaatttggagtctagtcctctttcccgtatcatctggaaagct
ctcaagcctctgcttgttgggaagatcctgtatacacctgacacgccagccacaaggcag
gttatggccgaggtgaataagacctttcaggagctggctgtgtttcatgatatgcaaggc
atgtgggaagagctcagcccgaagatctggaccttcatggagagtaacccagaaatggac
cttgttcggacactgttggacagcagaagcaatgaccacttttgggaacagcgattagat
ggcttagactggactgccaaagatatcctggcatttctggccaagcacccagaggatgtc
cagtctgctaatggctctgtgtacacctggagagaagccttcaatgagaccgaccaggca
attcagaccatctctcgattcatggagtgtgtcaacctgaacaagctggaacctgtagca
acagaagtccggcttatcaacaagtctatggagttgctggatgagaggaagttctgggct
ggtatcgtgttcaccgggatcactcctggcagtattgagctgccccgtcacgtcaagtac
aagatccgaatggacattgacaatgtggagaggacaaataaaatcaaggatgggtattgg
gacccgggtcctcgggctgacccctttgaggatatgcggtacgtctgggggggctttgcc
tacttgcaagatgtggtggagcaggcgatcatcagggtgctgacgggcaccgagaggaaa
actggcgtctatgtgcaacagatgccctacccctgttacgtcgatgacatcttcctgcgg
gtgatgagccggtccatgcctctgttcatgacgctagcctggatctactccgtggctgtg
atcatcaagggcatcgtgtacgagaaggaggcacggctgaaggagaccatgcgcatcatg
ggtctggacagcggtatcctctggttcagctggttcatcagtagcctcatcccgctgctc
gtgagcgccggcctgctggtggtcatcttgaaattaggaaacctgctgccctacagcgac
cccagcgtggtgtttgtcttcctgtctgtgtttgccgtggtgaccatcctgcagtgcttc
ctcatcagcacactcttctccagggccaacctggcggcagcctgtgggggcatcatctac
ttcatcctatacctgccctacgtgctgtgcgtggcgtggcaagactacgtgggcttcaca
ctcaagctctttgtgagcctgctatctcctgtggcctttgggtttggctgtgagtacttt
gccctttttgaggagcagggcattggggtgcagtgggacaacctgtttgagagccccatg
gaggaagatggcttcaacctcaccacatcagtctccatgatgctgtttgacacctttctc
tatggagtgatgacgtggtacatcgaggctgtctttccaggccagtatggaatccccaga
ccctggtattttccttgcaccaaatcctactggttcggtgaggaaagtgatgagaaaagc
caccctggttccagccagaagggagtatcggaaatctgcatggaggaggaacccacacac
ctgaagctgggcgtgtccattcagaacctgatgaaggtttaccgggatggcatgaaggtg
gctgtggatggcctggccttgaatttctatgagggccagattacctccttcctgggccac
aatggagctggaaagaccaccaccatgtcaatcctgactgggttgttccctcccacctcg
ggcactgcctacatcctggggaaggacattcgctttgagatgaacaccatccgacagaac
ctgggagtctgcccccagcataatgtgctgtttgacatgctgactgtggaagaacacatc
tggttctatgcacgtctaaaggggctctcagagaagcacgtgaaagcagagatggagcaa
atggccttggatgttggtttgccacccagtaaactgaaaagcaaaacaagtcagctgtca
ggtggaatgaagagaaagctgtctgtggctttggcctttgttgggggatccaaggttgtc
attctggatgagcccacagccggtgtggacccttactcccgtaggggaatatgggagcta
ctgctcaaatatcgacaaggtcgcaccattattctctccacacaccacatggatgaagca
gacatcctgggggacaggattgccatcatctcccatgggaagctgtgctgcgtgggctcc
tccctgtttctgaagaaccagctgggaacaggctactatctgaccctggtcaagaaggat
gtggaatcctccctcagttcctgcagaaacagcagtagcactgtgtcatatctgaaaaag
gaggacagtgtttctcagagcagttctgatgctggcctgggcagcgaccatgaaagtgac
acgctgaccatcgatgtctctgctatctccaacctcatcaggaagcatgtggctgaggcc
cggctggtggaagacattgggcatgagctgacttacgtgctgccctacgaagctgccaaa
gagggggccttcgtagaacttttccatgagattgatgaccggctctcagacctgggcatc
tctagttacggcatctcagagacgaccctggaagaaatatttctcaaagtggctgaagag
agtggggtggatgctgagacctcagatggcaccttgccagcaagacgaaacagacgggcc
tttggggacaagcagagctgtcttcgcccattcactgaagatgatgccattgatcctaat
gattctgatgtagatccagaatccagagaaacagacctgctcagcggaatggacggcaaa
ggctcctaccaggtcaagggctggaaactcacacagcagcagtttgtggcacttctgtgg
aagaggctgctgattgccagacggagtcggaagggattctttgctcagatcgtcctgcca
gctgtgtttgtctgcattgctctggtgttcagcctgattgtgcccccctttggcaagtac
cccagcctggaacttcagccctggatgtacaacgaacagtacacatttgtcagtaacgac
gctcctgaggacatgagcacccaggaactcttgaatgccctcaccagagaccctggcttc
gggacccgatgtatggaaggaaatccaatcccagacgtgccctgctccgtgggggaggag
gagtggaccactgccccagttccccagaccatcacggacctcttccaaaatggaaactgg
acgatggagaacccctcacccacctgccagtgtagcagtgacaaaatcaagaagatgctg
cccgtgtgtcccctgggggcagggggcctgcctcccccacagagaaaacagaacactgca
gacatccttcagaacctgacgggaagaaacatttcggactatctggtgaagacctatgtg
cagatcatagccaaaagtttaaagaacaagatctgggtgaatgagtttaggtatggagga
ttttccctgggtgccagtaattctcattcacttccttcaagtcaagaagttaataatgcc
atcaagcaagtgaagaagcacttgaagctggccaaggacagttctgcagatcgatttctc
agcaacttggggaggttcatgacgggactggacacgaaaaataacgtcaaggtgtggttc
aacaacaagggctggcatgccatcagctctttcttgaatgtcatcaacaatgccattctc
cgggccaacctgcagaagggagagaaccccagccagtatgggattactgctttcaatcac
cccctgaatctcaccaagcagcagctctcggaagtggctctgatgaccacatccgtggat
gtcctggtgtccatctgtgtcatctttgcaatgtccttcgtcccggccagcttcgttgtg
ttcctgatccaagagcgggtcagcaaagcaaagcacctgcagttcatcagtggcgtgaag
cctgtcatctactggctctccaattttgtgtgggatatgtgcaactatgtggttcctgcc
acgctggtcattatcatcttcatctgcttccagcagaagtcctacgtgtcctctaccaac
ctgcctgtgctagctcttctactgctgctgtacgggtggtccatcacacctctcatgtac
ccagcctccttcgtgttcaagatccccagcacagcctacgtggtcctcaccagcgtgaac
ctcttcatcggcatcaacggcagtgtggccacttttgtgctggagctctttaccaacaat
aagctgaataacatcaatgatatcctgaagtctgtcttcttgatctttccacatttttgc
ctgggacgggggctcattgacatggtgaaaaaccaggcaatggctgatgccttggaaagg
tttggggagaaccgttttgtttcaccactgtcttgggacttagtgggacgaaacctcttc
gccatggccgtggaaggggtggttttcttcctcatcactgttctaatccagtacagattc
ttcatcaggcccaggcctataaaagcaaagcttccccctttgaatgatgaggatgaagat
gtgaagcgggaaagacagagaattcttgatggtggaggacagaatgacatcttggaaatc
aaggagctgactaagatatatagaagaaagaggaagcctgctgttgacaggatatgcgtt
ggcattcctcctggcgagtgctttggacttctaggagttaatggggctgggaaatcatcc
actttcaagatgttaactggagataccactgttaccagaggagatgctttccttaacaaa
aacagtatcttatcagatatccatgaagtgcatcagaacatgggctattgccctcagttt
gatgccatcacggagttactgaccggaagagagcacgtggagttctttgccctcttgaga
ggagtcccagagaaggaagttggcaaggttggtgaatgggcaattcggaaactgggcctc
gtaaagtatggagaaaaatatgctggtaactatagtggaggcaataagcgcaagctctcg
acagccatggctctgattggcgggcctcccgtagtctttctggatgaacctaccacaggc
atggatcctaaagcccgacgattcttgtggaattgtgccttaagtattgttaaggaaggg
agatcagtagtgcttacatctcatagtatggaagaatgtgaagctctttgcactaggatg
gcaattatggtcaatgggaggttcaggtgccttggcagcgtccaacatctgaaaaatagg
tttggagatggttatacaattgttgtacgaatagcaggatccagccctgatctgaagcct
gtccaggagttctttggacttgcctttccaggaagtgttctaaaagagaagcaccggaac
atgctacagtaccagcttccatcttcattatcttctctggccaggatattcagcatcctt
tcccagagcaaaaagagactccacatagaagactattctgtttctcagacaacacttgac
caagtatttgtaaacttcgccaaggaccaaagtgatgatgaccacttaaaggacttgtca
ttacacaagaaccagacagtagtagatgtcgcagttctcacatctttcctccaggatgag
aaagtgaaagaaagttacgtatga
DBGET
integrated database retrieval system
