Vulpes vulpes (red fox): 112924160
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Entry
112924160 CDS
T05911
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
vvp
Vulpes vulpes (red fox)
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvp03009
]
112924160 (IGHMBP2)
03012 Translation factors [BR:
vvp03012
]
112924160 (IGHMBP2)
Enzymes [BR:
vvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112924160 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
112924160 (IGHMBP2)
Ribosome biogenesis [BR:
vvp03009
]
Eukaryotic type
Other ribosome biogenesis factors
112924160 (IGHMBP2)
Translation factors [BR:
vvp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112924160 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
ResIII
nSTAND3
IstB_IS21
AAA_16
SLFN-g3_helicase
AAA_22
UvrD-helicase
Helicase_RecD
Flavi_DEAD
AAA_25
Zot
AAA
PhoH
DnaB_C
ABC_tran
AAA_33
NPHP3_N
UvrD_C_2
NTPase_1
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
112924160
NCBI-ProteinID:
XP_025860008
UniProt:
A0A3Q7ST83
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MASTAVESFVTKHLDLLELERDAEVEERRSWQENISPKELQSRGVCLLKLQVSSQRTGLY
GRLLVTLEPRRCTSAAVLPSNSFTSGDIVGLYDEGNQLATGILTRITQRSVTVAFDASHD
FQLSLDRERAYRLLKLANDITYKRLKKALITLKKYHSGPASSLIEVLFGGSAPSPASNIE
PPLFCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAP
SNIAVDNLVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQA
FVNNRQTQDRREKSSVWNEVKLLRKELKEREEAAMLESLTSAAVVLATNTVCSQLLGRRQ
PATSVRLTVPIPPGASSDGPLRLLPDTHFDVVVIDECAQALEASCWIPLLKARKCILAGD
HKQLPPTTVSHKAALAGLSLSLMERLVEEHGVRVVRTLTVQYRMHQAIMRWASEALYHGQ
LTAHPSVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEEDDDQSKGNPGEVRLVSL
HIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFV
RSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAF
EYLDDIIPENYSHESSQGHGQAGAKPQSSAALSRKPPGSRPQEGAQEGAQEARAAAGLER
KRRGGKPSVPEVPSQPSLNGGSPEEAGSRDHADHFRAMIAEFVASEKTQLEFPPSLNSHD
RMWVHQIAEEHGLRHDSTGTGKKRFITVSKRAPPAPSAPSAPPAPPPAAGVGSIAPVGPT
APSPTQTKPPLGEQSGQDPLNLKALHLERLQREKSRQERPAMEGQQAPHSGPRTLPERKK
KKEAKGHAAVDLPSEEDFDALVAAAVKADNTCGLAKCTASVVTLGQLCQHCGRRFCLSHH
LPEIHGCGERARAHARQRISREGVLYAGSGTKDRSLDPAKRAQLQRRLDKKLDELTSQRK
SKRKEKEK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacggccgtggagagcttcgtgaccaagcacttggacctgctggaactcgag
agagacgcggaggtcgaggagcgcaggtcctggcaggaaaacatctccccaaaagaactc
cagagccgaggcgtctgtttgctgaagctgcaggtttccagccagcggactgggctgtac
gggcggctgctggtcaccttagagcccaggagatgcacatctgctgcggtgcttcccagc
aacagctttacttcgggcgatatagtgggtctctatgatgaaggcaatcagctggccaca
gggatcctgacccggatcacacagcgatcagtcacggtagcctttgatgcgtcccatgat
ttccagctgagcttggaccgggagcgggcctacagactgttaaaacttgccaatgacatc
acttacaagcgactgaaaaaggctctgataacgctaaagaagtaccattctggccccgcg
tcctcactcatagaggtcctcttcggcggatcagcccccagtcctgccagcaatatagag
ccgccgctgttctgcaacacctccctggacgcctcccagaaggaagcagtctcctttgcg
ctgtcccagaaagaacttgccatcatccatgggcctcctggcaccgggaagaccaccact
gtggtcgagatcattcttcaggctgtgagacagggcttaaaggttctgtgctgtgctccc
tctaacatagctgtggacaatctggtggagcgcctggctcggtgtaagcagaagatcctg
cgcctcgggcaccctgcccgcctcctggagtccattcagcagcattccctcgatgcggtg
ttagcgcggagtgacaatgcccagattgttgcagacatcagaaaggacattgatcaggcc
tttgtgaacaacaggcagacccaggataggagagagaagagtagtgtttggaatgaagtc
aagctgttaaggaaagagctgaaggagagggaggaagccgcgatgctggagagcctcact
tcggcagcggtggtgctggcgaccaacactgtgtgttcacagctgctaggacgcagacag
ccagcaacttctgtaaggctcacggttccaattccaccaggtgcctcttctgatggtccc
ctgaggttactgcccgatacccactttgatgtggtggtcatcgacgagtgtgcgcaggct
ctggaagctagctgctggatccccctgctgaaggccaggaagtgcatcctggctggagat
cacaaacagctgccccccaccacggtctctcataaggctgccctggcggggctgtcactc
agcctgatggagcgcctggttgaggagcatggcgtgcgtgtggtgcggacactgacggtg
cagtaccgcatgcaccaggccatcatgcggtgggcctcggaggccctgtaccatgggcag
ctcacagcccacccttccgtggctgggcaccttctgcgggacctcccgggagtggctgcc
acagaggaaacaggcatccccctgctgctcgtggacacagccggctgcgggctgtttgaa
ctcgaagaggatgacgaccagtctaaggggaaccctggtgaagtgcgccttgtcagtctg
cacatccaggccctggtggatgctggtgtccaggcaagcgacatcgccgtcatcacgcca
tacaacctccaggtggacctgctcagacagagccttgcccacaggcaccccgagcttgaa
attaagtcagttgacggcttccaaggccgagagaaggaggctgtggtactgtccttcgtc
agatccaataggaaaggtgaggtgggcttccttgctgaggaccggaggatcaacgttgcc
gtcacccgtgctcggcgccacgtggcagttgtgtgcgattctcgcactgttagcaaccat
gccttcttgaagaccctggtggatcacttcacagagcacggggaggtgcgcaccgccttt
gaatatcttgatgacatcatccctgaaaactactcccacgagagttcccagggccacgga
caagctggtgcgaaaccccaaagctctgcggcattgtccaggaagcctcctgggagccgg
cctcaggagggggcccaggaaggggcccaggaggccagagcagctgctgggctggagcgg
aagaggcggggtgggaagccctcggtccctgaggtcccttctcagcccagcctcaatgga
ggcagcccagaggaagcggggagcagagaccatgcagaccacttcagggccatgattgcg
gagtttgtggcgagtgagaaaactcagttggagtttcctccttccctgaactcacacgac
aggatgtgggtccatcagatcgccgaagagcacggactgagacatgacagcactgggacg
gggaagaagaggttcatcactgtgagcaagagagcccctcctgccccgtctgcgccgtct
gcgccgcctgccccgccgcctgcagcaggggtcggcagcatagcccctgtcggtcccaca
gcccccagccccacacagaccaagccccctcttggggagcagagtggccaggaccccctg
aatttaaaggccctgcacctggaaagactgcagagagagaagagccggcaggagcggcca
gccatggaggggcagcaggccccgcactcagggccacgcacgctacctgagaggaagaag
aagaaagaggcaaaaggacacgcggctgtagatttgcccagcgaggaggactttgatgcc
ctggttgcggctgccgtgaaggcagataacacctgcggcctcgctaagtgcacagccagc
gtggtgaccctgggccagctctgccagcactgtggccgccggttctgcctcagccaccac
ctgcccgagatccatggctgtggggagagggctcgcgcccacgcccggcagagaatcagc
cgggaaggagtcctctatgccggcagtgggaccaaggacaggtccctggacccagccaag
agggcccagctccagaggaggctggataagaagctggatgagctgaccagccagaggaag
agtaaacggaaggagaaggaaaagtga
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integrated database retrieval system
