KEGG   Vulpes vulpes (red fox): 112926297
Entry
112926297         CDS       T05911                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03030  DNA replication
vvp03410  Base excision repair
vvp03420  Nucleotide excision repair
vvp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112926297 (RFC4)
   03410 Base excision repair
    112926297 (RFC4)
   03420 Nucleotide excision repair
    112926297 (RFC4)
   03430 Mismatch repair
    112926297 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvp03032]
    112926297 (RFC4)
   03036 Chromosome and associated proteins [BR:vvp03036]
    112926297 (RFC4)
   03400 DNA repair and recombination proteins [BR:vvp03400]
    112926297 (RFC4)
DNA replication proteins [BR:vvp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    112926297 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    112926297 (RFC4)
Chromosome and associated proteins [BR:vvp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    112926297 (RFC4)
DNA repair and recombination proteins [BR:vvp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     112926297 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    112926297 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 DUF815 AAA_16 AAA_30 AAA_22 AAA_11 AAA_24 Mg_chelatase AAA_28 RuvB_N SLFN-g3_helicase DNAX_ATPase_lid AAA_19 AAA_5 ResIII Gp44_lid Viral_helicase1 TIP49_C AAA_7 HrcA_DNA-bdg
Other DBs
NCBI-GeneID: 112926297
NCBI-ProteinID: XP_025863121
UniProt: A0A3Q7T4H3
LinkDB
Position
Unknown
AA seq 363 aa
MQAFLKGTSVSTKPPLKDRGIAATAGSSGENKKTKPVPWVEKYRPKCVDEVAFQEEVVAV
LKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVRE
KVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAEKEHVKVSNEAIAYLVKVSEGDLRKA
ITFLQSATRLTGGKEITEKVITDIAGVIPAETIDGIFAACQSGSFDKLEAVVKDLIDEGH
AATQLVSQFHDVVVENDNLSDKQKSIITEKLAEADKCLADGADEHLQLISLCATVMQQLT
QNC
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcaggcttttctaaaaggcacatctgtcagtactaaaccaccactgaaggatcgagga
atagctgccacagctggaagcagtggagagaacaagaaaaccaaacctgttccatgggtg
gaaaaatatcgcccaaaatgtgtggacgaagttgctttccaggaagaagtggttgcagtg
ctgaaaaagtctttagagggagctgatctccctaatctcttgttttatgggccacctgga
actggaaaaacatctactattttggcagcggctagggaactctttgggcctgaacttttt
cgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttagagaa
aaagtgaagaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagccgtgt
cctccttttaagattgtgattttggatgaggcagattctatgacctcagctgctcaggca
gctttgcggcggaccatggagaaggagtctaaaaccacccgtttctgtctcatctgcaac
tacgtcagccgaataattgaacctctgacgtctagatgttctaagttccgattcaaacca
ctgtcagataaaattcaacagcagcgattactagacattgccgaaaaagaacatgtcaaa
gttagcaatgaggcaatagcttatcttgttaaagtgtcagaaggagatttaagaaaagcc
attacatttcttcaaagtgctactcgattaacgggtggaaaggagatcacagagaaggtg
atcacagacattgctggggtaataccagctgagaccattgatggaatatttgctgcatgt
cagagtggctcttttgacaaactggaagctgtggtaaaagacttaatagatgagggtcat
gcagcaactcagcttgtaagtcaatttcatgatgtggttgtagagaatgataatctttct
gataaacagaaatccatcatcacagaaaaacttgctgaagcagataaatgcttagcagat
ggtgccgatgaacatctacaactgatcagcctttgtgctacagtgatgcagcagttaaca
cagaattgttaa

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