Vulpes vulpes (red fox): 112927438
Help
Entry
112927438 CDS
T05911
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03013
Nucleocytoplasmic transport
vvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112927438 (UPF3A)
03015 mRNA surveillance pathway
112927438 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112927438 (UPF3A)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112927438 (UPF3A)
mRNA cycle factors
P-body specific factors
112927438 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
112927438
NCBI-ProteinID:
XP_025864577
UniProt:
A0A3Q7TTI1
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MRSEEEGVGGPGAAVPGRGPSGREKQSAGEVRFRRESPWREAEAHPASSSGGGASMGKPR
EEKTVLSKVVVRRLPPSLTEGQLEEQLRPLPAHDYFAFFAADVSLYPHLYSRAYINFRNP
EDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFL
ETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKQEERRR
RELEKKRLREEEKRKKREEERCKRKEADREKRAAEREVRIKLLKKPEKGQEPTEKPKERG
EEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDKEQREMERRLRAKEPETQRC
HMDGSMHRVHCEFNKFARRNEEEPRWGKGVPPDRGKKGNQDSSIPVEAAEWPGREHKSEG
GLASSMECPGNKDLPALQLYQPEAHIRAQESGGGISVEGCDGSRGEAEDLALAGSQKSEE
AG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagaggaggagggggtcggaggccctggggcggcagttcctgggcgcggcccg
agcgggagggagaagcagtccgctggggaagtccggttccgccgggagtcgccgtggcga
gaagcagaggcacacccagcctcgtcctctggcggtggggccagtatgggcaaacctcgc
gaggagaagacggtcctgagcaaggtggtggtccggcggcttccccccagcctcaccgag
gggcagctggaagagcagctgcgcccgctgccggcgcacgactacttcgcgttcttcgcc
gccgacgtgagtctttatcctcatctctactcaagagcatacattaattttagaaatcct
gaggacatccttctttttagagatcgttttgatggctatatcttcattgacagtaaaggc
ctagaatatcctgcagtggtagaatttgccccattccagaagatagccaaaaagaagcta
aagaaaaaagatgccaaaactggaagcattgaagacgatccagaatataagaagtttttg
gaaacttactgtgtggaggaagagaaacctaatgcgaatcccgaaactcttctgggagac
atagaggcaaagacaagagaacttattgctagaagaactacacctcttttggaatatatt
agaaatagaaaattagagaagcagaggattcgagaagagaagcaagaagagcgaaggagg
agggaactagagaagaagcgtttacgggaagaagaaaagaggaagaagagagaagaggag
aggtgtaagaggaaagaggcagacagagagaagagagctgctgagagagaagtaaggatt
aagcttcttaagaaaccagaaaaggggcaggaaccaactgagaagccaaaggaaagagga
gaggaagtggatgtaggagatgggaagcaggagatgagtcttagctatgctgtcctgaag
cccatgcccttggagagctcgctggagaagcccaggaaaaagtcacagaatgatagtgac
aaagagcaaagagagatggagagaagacttcgagcaaaggagcctgagacacaaagatgc
cacatggatggcagcatgcacagagtgcactgtgagtttaacaagtttgcaaggagaaat
gaagaagagccgagatgggggaaaggagtacccccagaccgagggaagaaggggaaccag
gacagtagcatccctgtggaggcagcagagtggcctgggagagaacacaagagtgaaggt
ggcctagcatccagcatggagtgccccggaaacaaggatttgccggccttgcagctgtac
caaccagaagctcacatccgagcacaagaaagtggtgggggaatttctgttgagggctgt
gatgggagcaggggcgaggctgaagatttggcactggctggttcccagaagagtgaagag
gcagggtga
DBGET
integrated database retrieval system
