Vulpes vulpes (red fox): 112929436
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Entry
112929436 CDS
T05911
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112929436 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvp03019
]
112929436 (EDC4)
Messenger RNA biogenesis [BR:
vvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112929436 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112929436 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
DUF445
WDR55
Motif
Other DBs
NCBI-GeneID:
112929436
NCBI-ProteinID:
XP_025867311
UniProt:
A0A3Q7TPW1
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLTGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEENEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQSNPDVVAPLPTHT
THEDFAFGESRPELGSEGLGSAPQGSQPDLRRIVELPAPADFLSLSNETKPKLMTPDAFM
TPSTSLQQIAASPSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQL
DGSLTMSGSSSLQASPRSLLPSLLPGPADKLTPKVPGQVPTAASALSLELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALHLLSP
RPRPGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDNQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTKVPT
PRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAMGSRLMEHQGPEPPEDWPALIWQQQREL
AELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAIAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQ
HQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSL
GKVARRLSLMLHGLVTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcggccatctaatgcc
tacaatggggatctcaatgggcttcttgtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgggccatgccacctattaaccttcaggaaaagcaggtc
atctgcctcacaggagatgacagctctacatgcatcgggattttggccaaggaagtggag
attgtggccagcagtgactctagcatctcaagcaaagcacggggcagcaacaaggtgaaa
atccagcctgtggccaagtatgactgggaacagaaatactactatggcaacctgattgct
gtgtccaactcctttttggcctatgccattcgggctgccaacaatggctcggcgatggtg
cgggtgatcagtgtcagcacttcagagcggaccctgctcaagggcttcacaggcagtgtg
gctgatctggcctttgcacacctcaattcctcacagctggcctgcctggatgaggcgggc
aacctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtc
catatccagcagccagagggcacgccactgaaccacttccgcaggatcatctggtgcccc
ttcatccctgaggagaatgaggactgctgtgaggagggcagcccaacagtggccttgttg
catgaggatcgggctgaggtgtgggatctggacatgctccgctccaaccacagtacttgg
cctgtgcgtgtcagccaaatcaagcaaggcttcatcgtggtgaaaggccacagcacctgc
ctaagtgaaggggccctctcacctgatgggactgtcctggcaactgcaagccatgatggc
tttgtcaagttttggcagatctacattgaggggcaggatgagccaaggtgtctgcacgaa
tggaagcctcatgatgggcggtccctttcctgcctcctgttctgtgataaccacaagaaa
caggatcctgaagtccctttctggaggttccttattactggcgctgaccagaatcgggaa
ctgaagatgtggtgcacagtgtcctggacctgcctgcagaccattcggttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgcctggacctctcggcagaa
taccttattctcagtgatgtgcaaaggaaggttctctacgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccatcctgtg
ctgagcttcggcatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcct
gccgaggaggagaatgacagcctaggggctgatgggacccatggagctggtgccatggag
tctgcggctggtgtgctcatcaaactcttttgtgtacatactaaggctttgcaggatgtg
cagatccgtttccagccacagtcgaaccctgatgtggtggccccgctccccacccacacc
acccatgaggactttgcatttggagagtctcggcctgaactgggctctgagggcctgggg
tcagctccccagggctcccagcctgacctccgacgcattgtggagttgcctgcacctgct
gacttcctcagtctgagcaatgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcacctccctgcagcagatcgctgcttcccccagcagcagcagtagcagctcc
agctccagctccagctcctcctctctcacagccgtgtctgccatgagcagtacctcagct
gtggacccctccttgcccaggccacctgaggagctgaccttgagccccaagctgcagctg
gatggtagtcttacaatgagcggcagtagcagcctacaagcaagcccacgcagcctcttg
cccagcctacttccaggtccagctgacaaactgactcccaaagtacctgggcaggtgcct
actgctgcctctgcactatcactggaactgcaggaagtagagcccctggggctaccccag
gcttctcctagccgcacccgttcccctgatgttatatcctcagcttccactgccctgtcc
caggacatccccgagattgcatctgaggccctgtcccgtggttttgtctcctctgcccct
gagggccttgaaccagacagtatggcctcagctgcctcagcactacacctgctgtcccca
cggccccgaccagggcccgaacttggctcccagcttggcctggatggaggccctggggat
ggggatcggcatagcaccccttcccttttggaggcagcattgacccaggaggccacagcc
cctgacaatcaggtctggcctacggcaccagacattactcgtgagacctgcagcagcctg
gcggagagtcccaggaacggtctccaggagaagcacaagagcctggccttccaccgacca
ccttatcatctgctgcagcaacatgacagccaggatgccagtgctgagcaaagtgaccat
gatgatgaggtggctagccttgcctctgctgcagggggctttggcaccaaagttcccact
ccccggctaccggccaaggactggaagaccaagggttctcctcgagcctcacccaagctt
aagagaaagggcaaaaaagatgacggggattcggccatggggtcccggctcatggagcac
caggggccagaacctcccgaggactggccggcactgatttggcaacagcagcgtgagctg
gcggagctgcgtcacagccaggaggagttgctgcagcgtctttgcacccagctcgaaggc
ctgcagagcaccgtcacgggccacgtagaacgcgctctagagtcacggcacgagcaggag
cagcggcggctggagcgggcactggctgaagggcagcagcggggtgggcagctgcaggag
cagctgacgcaacagctgtcccaggcgctgtcttcggccatagctgggcggctagagcgc
agcatacgggatgagatcaagaagacggtgcctccatgtgtctccaggagtctggagcca
gtggcaggccagctgagcaactcagtggccaccaagctcacagccgtggagggtagcatg
aaagagaatatctccaagctgctcaagtccaagaacttgacagatgccattgcccgagca
gctgcagacacattacaggggccaatgcaggctgcctaccgtgaagccttccagagtgtg
gtgctgccagcctttgagaagagctgccaggccatgtttcagcagatcaatgatagcttc
cgattgggcacgcaagaatacttgcagcagctagagagtcacatgaagagccggaaggca
cgagaacaggaggcacgggagcctgtgttggcccagctgcggggcctggtcagcacactg
cagggtgccactgagcagatggcagccactgtgtccagcagcgttcgagctgaggtgcag
caccagctgcacgtggctgtgggcagcctgcaggagtcaattttagcgcaggtacagcgc
attgttaagggtgaggtgagtgtagcactcaaggagcaacaggccgccgtcacgtctagc
atcatgcaggccatgcgttcagccgctggcacacctgtccccgctgcccacctcgactgc
caggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgactgctgctgacctgaacctggtgctatatgtgtgtgaaactgtggac
ccagggcaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctc
atccagcagctggcctctgatcttggtactcgaactgacctcaagctcagttacttggaa
gaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtc
atggcccaggtgcgccagaagctcttccagttcctgcaggctgagccacacaactcactt
ggcaaagtggcccggcgtctcagcctcatgttgcacggcctcgtaacccctagcctccct
tag
DBGET
integrated database retrieval system
