Vulpes vulpes (red fox): 112934315
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Entry
112934315 CDS
T05911
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
vvp
Vulpes vulpes (red fox)
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vvp04515
]
112934315 (PCDHB1)
Cell adhesion molecules [BR:
vvp04515
]
Cadherins
Protocadherins
112934315 (PCDHB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
112934315
NCBI-ProteinID:
XP_025873513
UniProt:
A0A3Q7TUL7
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAVARRKFLQSRQVGSLLFLLCISTGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGSKGHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRAE
VRVFDINDNAPIFLNKQPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHL
HTRFRSQGPKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVP
QFSRLVYRVQVPENSANGSLVATVSATDLDEGSNKEITYSLAQNPETILQTFQIDSQTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDIQVGGKIICFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNV
TVVAMDTGPPSLFTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAIFIGKVHAEDLD
LGENAQVTYTLLPPKSGDLAVFAYISINSDNGKLYALRTIDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTSPCNDLVPRSADVGYLVTKVVAVDGDSGRN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPMIQKLIVLVQDHGQPVLSTTASLN
ILLVDGFSEPYLQFRNPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFVLHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQGGASGSLSQPCPYEMCSATGTSNSEFRFLKRFMPNFPF
PHGTGEAKTEACSSLPPDSERNRSQGSEDHGRVSDNCM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcgcgcagaaaattcttgcagagcaggcaagtagggtctcttctctttttg
ttgtgcatatctacggggagcgcggccactatccgctattcggtggcggaagagatggag
agcggttcgtttgtggctaatgtggccaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcgactggtttccgaaggcagcaaagggcatttccggctccaccgcaag
acaggggatctgttcgtgaaggagaaactggatagggagtcgctttgtggcaaagctgac
ccgtgtgtcctgcactttgaaatagtcctggtggagccgctgcagtcctttcgtgcggag
gtcagggtatttgatatcaatgacaatgccccgattttcctgaacaagcagccgctttta
aagattccggagagcacacccttgggttcacgttttcccctgcagagcgcccaggatctg
gacgtgggcctcaatggtcttcaaaactacaccttgagccccaacgcgtatttccacctg
cacacccgttttcgcagccaagggcccaaatatgccgagctggtcctggataagcctctg
gacagagaggagcagcctgaagtcaacctgaccattacggccgtggacggcgggtcccca
cccaaatctggcatcgcccacatccgcgtggaggttctggacgtcaatgaccacgtacct
cagttctctagactggtgtaccgcgttcaggtgccggaaaacagcgccaatggttctttg
gtggccactgtgagtgccacagacctggacgaaggttccaacaaggaaataacgtactcc
ttagctcaaaacccagaaacaattctccagacatttcagattgactctcaaactggagag
gttcgactaagagggcccctagattttgaagcaattgaaacatacgatattgacattcaa
gccaccgacggagggggcctctctgcccacagcaaagtcctggtggaagtggtggatgtg
aatgacaatccacctgaggtgacagtctcctctgtatccagccctctccccgaagactcc
ccactacaaactgtagtagcccttttctctattcgagaccgggacattcaggtgggagga
aaaatcatctgcttcctcagagaagaccttccttttgcagtcaaacctactttccggaat
tcttactcactggttactgacagaggcttggatcgggaagaggtttccggctacaatgtc
accgttgttgccatggatactgggccacccagtctattcacagaaactgtgattgaggtg
ctaatatctgacattaatgacaaccccccagtatttcaggaagactcctacattttgact
gttcgagaaaacaacagcccagcaatttttattggcaaagttcatgctgaagatctagat
ttgggtgagaatgcccaagtaacatacactttgctgcctccaaaaagtggagatttagcc
gtgtttgcttatatctccataaattcagataacgggaagctctatgcactgagaaccatt
gattatgaggccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcttg
tcattgagtagccaggttactgtcagagtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcacctcaccctgcaatgacttggtgcccaggtct
gcagatgtgggctacctggtaaccaaggtagtggctgtggatggtgactcaggtcggaat
tcttggctctcatatcatctccttaaggccactgaccctgggttattctctgttcaacaa
caaaatggggaaatccgtacattgcggcagatatctgagagagaccctatgattcagaaa
ctgatcgttcttgttcaagatcatggccaaccagttctttccactactgcctcactcaac
atcttgctggtagatggattttctgaaccttatctgcaattccggaatccatccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctagctgtgctttccttt
ctctttctcctgtctgtcacagtgatctttgttcttcacatctaccagaaggttaaatat
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaacaacctg
gtacaaggaggggccagtgggtctttatctcagccgtgtccctatgaaatgtgctcagcc
actggcaccagcaatagtgagtttcggtttcttaagcgctttatgcccaactttcccttc
ccccatggcactggagaggcaaaaacagaggcttgctccagtttaccaccagattctgag
aggaataggtctcaggggtcagaggatcatggtcgagtatctgacaactgtatgtag
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