Vulpes vulpes (red fox): 112935461
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Entry
112935461 CDS
T05911
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112935461 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvp03009
]
112935461 (REXO1)
Ribosome biogenesis [BR:
vvp03009
]
Eukaryotic type
Pre-60S particles
RNases
112935461 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
TIL_2
Motif
Other DBs
NCBI-GeneID:
112935461
NCBI-ProteinID:
XP_025874970
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MVGVIVPILQMSTLRPRDGEPLSCVCMAGLGYDPYNPELPKPPVQRENGALGRGDEPRSD
ILELELVNQAIEAVRSEVELEQRRYQELLETTREHSSAEAPAVAPRGPTACSAAGLDEDA
FPLSFDYNPGGRPGLSSPDASYQPTPLATAAEAGSKYSLASLDRAQGHGGGGGSALEYVP
KAVSQPQRYGRPIPSSKYVLDDSKPSTDLEYDPLSNFSARLLSRASSKDDRAPKRPRGSR
GSEPYTPALKKPCDPFAGCDARFSDSDDDATAAPVDGPITTSPPRAQSGTETKAPGQPGS
REVQDTEEGGLRETKEMAVQYDVEDLGQPPKAPAGAPVAKPSSPAKATREPGGPKQGRPK
KKKSGALPVTTHKDSARKKDKGRDGEHGRPAGKPGADRRGPQAGSPRHRAEQPEGTKKKP
SSATPVASSGKSRPDRGGAHQLPVRTGGKTPSGKLAERKARSLDEGASRDAPKLQKRALS
HADLFGDESEDEGPGPTAPPAPPHLSSDSDSDSDSDSSLGSSAAQGPRKRLKAPLPAPAS
PSSSSSSSSEAGESVDYSALEKEVDFDSDPMEECLRIFNESTSVKTEDRGRLARQPPKED
KSEDKGHSALTTLFPGQKRRISHLSKQGKEAEPVRKGPAPPARPPTAQEVCYRRAQQAQR
DSATWLQAAQQPTEKPSSIHISAPGEKRRIAHVPNPRLAAAPTGAKRTLAASSSQPPNGP
EPGSQPLKARTLSGMASKTTTTVTPKRVAHSPSLQSLKKPIIPKEFGGKVPTVIRQRYLN
LFIEECLKFCSSNQEAIEKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLVPSSVPGLN
KTSGRRVVSHEMVLGGKLAAKTSFSLSRPSSPRVEDLKGAALYGRLKEYLLTEDQLKENG
YPFPHPERPGGAVIFTAEEKKPKDSSCRICCRCGSEYLVSPSGRCVREEECYYHWGRLRR
NRVAGGWETQYTCCSAAIGSTGCQVAKQHVQDGRKENLEGFVKTFDKELSEDAHPGIYAL
DCEMSYTTYGLELTRVTVVDTDMQVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSISLR
DVQAVLLSMFSADTVLIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMAD
YLRQIIQDNVDGHSSSEDASACMHLVIWKIREDAKTKR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggtaggggtgattgtccccattttacagatgagcacactgaggcccagagatggggag
ccactctcctgtgtgtgcatggctgggctcggttatgatccgtacaaccccgagctgccc
aagccccccgtgcagagggagaatggagccctgggcagaggggacgagccccgctcggac
atcctggagctggagctggtcaatcaggccatcgaggccgtgcgctctgaggtggagctt
gagcagcggcggtaccaggagctcctggagacgacccgtgagcacagctcagccgaagcc
cccgccgtggcaccccgaggccccaccgcttgttccgccgctggcctggatgaggacgcc
ttcccgctgtcattcgattacaaccctggtggccgccccggcctgtcgagccctgatgcc
agctaccagcccaccccactggccactgctgctgaggcaggcagcaagtactcgctggcc
tctctggatcgggcacagggccatggtggggggggcggcagtgccctggagtacgtcccc
aaggctgtgagccagccccagcgatacggccgccccatccccagcagcaagtacgtgttg
gatgactccaagccatccacagacctggagtatgaccctctgtccaacttctctgcccgg
ctgctcagcagagccagttctaaggatgacagggcccccaagaggcccaggggctcccgg
ggcagcgaaccctacacgcctgccctcaagaagccctgcgaccccttcgccggctgcgac
gccaggttctcagactcagatgatgatgccaccgcagctccagtggacgggcccatcacc
accagcccccccagggcccagtcgggcactgagaccaaggcccctgggcagcccggctcc
agggaggtccaagacactgaggagggtggcctgcgggagaccaaggagatggcagtgcag
tacgacgtggaggacctcgggcagccccccaaggctcctgctggggcgcctgtggccaag
cccagctcgcctgccaaggccacccgggagcctggtggccccaagcagggaagacccaag
aagaagaaaagtggggcactgcctgtcaccacccataaggacagcgcccggaagaaggac
aagggcagagatggagagcacgggaggccggccgggaagcccggggcagaccggaggggc
ccgcaggccggcagcccccggcatagggctgagcagcccgaagggaccaagaaaaagcca
tcttcggccaccccagtggccagctcagggaaaagccggcccgaccgcgggggtgcccac
cagctgccagtcaggacgggtgggaagaccccatctgggaagctggccgagcggaaggcc
cgctcgctggacgagggtgcctcccgggatgcccctaagctgcagaagcgggccttgagc
cacgcagacctcttcggggacgagagtgaagacgagggccccgggcccacagcgcccccc
gccccaccccacctcagctccgactcggactccgactcagactccgacagcagcctgggc
agctcagcggctcaggggccccggaagcgcctcaaggcccctctgcctgcncccgcctca
ccctcctcctcctcctcctcctcctctgaggccggtgagagtgtggactactcggctctg
gagaaggaggttgacttcgactccgaccccatggaggagtgtctacgcatcttcaatgag
tccaccagcgtcaagacggaggacaggggccggctagcccggcagccccctaaggaagac
aagagcgaagacaaggggcattctgctctgaccactctgttccctgggcagaagaggaga
atttctcatctctccaagcaaggcaaggaggcagagccggtgaggaaaggcccagccccc
cctgcccggcctcccactgcccaggaggtatgctatcggcgggcccagcaggcccagagg
gactcagccacctggctccaggctgcccagcagccaacagagaagccatcctccatccac
atctcagctcctggtgagaagaggaggatcgcccatgtccccaacccccgcttggctgca
gcccccacaggtgccaagaggaccctcgccgccagcagcagccagcctcccaatggcccc
gagccaggcagccagcccctgaaggcccgcacgttgtcaggcatggcgtccaagaccacc
accaccgtcacccccaagcgcgttgcccacagcccatctttacagagtttaaagaagccc
attattccgaaagagttcgggggcaaagtccccacggtcatccgccagcggtatctgaac
ttgttcattgaggaatgcctcaagttctgctcttcaaaccaggaggccatagagaaggcg
ctgaacgaggagaaggtggcctatgaccgcagtcccagcaagaacatctacttgaacgtt
gctgtgaacaccctcaagaagctgcggggcctggtccccagctccgtgcctggtctcaac
aaaaccagcggccggagggtcgtgtcccatgagatggtgctggggggcaagttggccgcc
aaaaccagcttctcgctcagccgcccaagcagcccccgggtggaagatctgaaaggggcc
gccctgtacggccgcctcaaggagtacctgctcacggaggaccagctcaaggagaacggg
taccccttcccacaccctgagcggccagggggcgccgtcatcttcacggctgaggagaag
aagcccaaggactcctcctgcagaatctgctgccggtgtggcagtgagtacctcgtgtcc
ccgtcgggccgctgtgtgcgcgaggaggagtgctactaccactgggggcggctccgccgg
aaccgagtggctggtggctgggagactcagtacacgtgctgctcggctgccattggctcc
actggctgtcaggtcgccaagcaacacgtgcaggacggccggaaggaaaacctcgaaggc
tttgtgaagactttcgataaagaactttcagaagacgcccacccggggatttacgccctt
gactgtgaaatgtcctacaccacgtatggcctggagctgacgcgtgtcacggtggtggac
acggacatgcaggtggtttacgacaccttcgtcaagccggacaatgaaattgttgactac
aacaccaggttttcaggggtgactgaggctgacctcgccgacacgagcatctcgctccgg
gacgtccaggctgtcctgctgagcatgttcagcgccgacaccgtcctcatcggacacagc
ctggagagtgacctgctggccttgaaggtcatccacagcaccgtggtggacacgtccgtg
ctcttcccgcaccgcctgggcctcccctacaagcgctccttgcggaacctcatggctgac
tacctcagacagatcatccaggacaatgtggacgggcacagctccagcgaggacgccagc
gcctgcatgcacctggtgatctggaagatccgagaagacgccaagaccaagcggtga
DBGET
integrated database retrieval system