Vibrio vulnificus CMCP6: VV1_0567
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Entry
VV1_0567 CDS
T00108
Symbol
dapB
Name
(GenBank) dihydrodipicolinate reductase
KO
K00215
4-hydroxy-tetrahydrodipicolinate reductase [EC:
1.17.1.8
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu00261
Monobactam biosynthesis
vvu00300
Lysine biosynthesis
vvu01100
Metabolic pathways
vvu01110
Biosynthesis of secondary metabolites
vvu01120
Microbial metabolism in diverse environments
vvu01230
Biosynthesis of amino acids
Module
vvu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VV1_0567 (dapB)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
VV1_0567 (dapB)
Enzymes [BR:
vvu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.8 4-hydroxy-tetrahydrodipicolinate reductase
VV1_0567 (dapB)
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Motif
Pfam:
DapB_C
DapB_N
ADH_zinc_N
Epimerase
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
AAO09084
UniProt:
Q8DEM0
Structure
PDB
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All DBs
Position
I:complement(581049..581858)
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AA seq
269 aa
AA seq
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MVRIAVAGAAGRMGRNLVKAAHHNPVAKVAAGSERPESSLVGVDLGELCGEGKFDVVVCD
DLAKQIDQFDVIIDFTAPASTLNNLALCQQYGKSIVIGTTGFTEEQREQIDLVAQQVPVV
MAPNYSVGVNLVFKLLEKAAKVMGDYCDIEIVEAHHRHKVDAPSGTAIGMGEAIAGAMGN
KLSDVAVYAREGITGERTKDEIGFATIRAGDIVGEHTAMFADIGERVEITHKATDRMTFA
NGAVKAAVWLHEKPAGFYTMTDVLGLNDL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaattgcagtggcaggagcggcgggtcgtatgggtcgcaatttggttaaagca
gcacatcacaatcccgtagccaaggttgccgctggctcagagcgtccagaatcatcactg
gttggtgtcgaccttggtgagctatgcggtgaaggtaagtttgacgttgtagtatgtgat
gatttagccaaacagattgatcaatttgacgtaattattgactttaccgctccagcaagc
accttgaacaatttggcgctttgccaacaatatggcaagagtattgttattggtactact
ggctttaccgaagagcaacgtgagcagatcgatctggtcgcgcaacaggtacctgtggtc
atggcgccaaattactctgtgggcgtgaatcttgttttcaagctgcttgaaaaagcggct
aaagtgatgggcgactactgtgacatcgaaattgtggaagcgcatcaccgccacaaagtg
gatgctccatcgggtacagctattggtatgggcgaagcgattgctggtgccatgggtaat
aaactcagtgatgttgccgtctatgctcgtgaagggatcactggagagcgaaccaaagac
gaaattggtttcgcgaccattcgagcgggggatattgttggcgagcataccgcgatgttt
gctgatattggtgagcgtgtagaaattacccacaaagcaacagaccgtatgacttttgct
aatggtgccgtcaaagccgcagtgtggctgcacgaaaaacctgccgggttttataccatg
acagatgtccttggtcttaacgacctgtaa
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