Vibrio vulnificus CMCP6: VV1_0901
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Entry
VV1_0901 CDS
T00108
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03030
DNA replication
vvu03410
Base excision repair
vvu03420
Nucleotide excision repair
vvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV1_0901
03410 Base excision repair
VV1_0901
03420 Nucleotide excision repair
VV1_0901
03440 Homologous recombination
VV1_0901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvu03032
]
VV1_0901
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_0901
Enzymes [BR:
vvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV1_0901
DNA replication proteins [BR:
vvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VV1_0901
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VV1_0901
NER (nucleotide excision repair)
GGR (global genome repair) factors
VV1_0901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AAO09403
UniProt:
A0A3Q0L2T3
LinkDB
All DBs
Position
I:complement(912757..915552)
Genome browser
AA seq
931 aa
AA seq
DB search
MATIPENPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFASDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHQVIKAMGLPLIAIEGVEADDVIGT
LAYQASQQGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLSQLYDHLDDIAALSFRGSKTMAKKLVDNK
DNALLSYQLATIKLDVALQETPESLLKTEPNKDELIKLYGQLAFKSWLNELLEGGTGVVE
ADEKAQTSVRSGASPVESEINNAAANIDRSQYQTIFDQATFDIWLDKLKASELFAFDTET
DSLDYMVANLVGLSFAVAEGEAAYVPVAHDYLDAPEQLDRDWVLAQLKPLLEDDTKAKVG
QNLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQLAG
KGKNQLTFNQIDLNEAAVYAAEDADVTLRLHNRLFANIEQDEKLNAIYQEIEVPLVPVLS
RMERTGVLIDDMKLSAQSQEIAVRLGELEQKAYEIAGQPFNMNSPKQLQTILFEQMGLPV
IKKTPSGTPSTAEEVLQELALDYPLPSVIMEYRGLAKLKSTYTDKLPKMINPHTGRVHTS
YHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPHGYKILAVDYSQIELRIMAHLS
GDQALLDAFQQGKDIHAATAAEIMGVSIEQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLG
IPRGEAQAYMDKYFERYPGVMQYMEDTRSNAAQHGYVETIFGRRLHLPEITSRNVMRRKA
AERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESCLTEIE
SKVQQLMESAAQLNVPLVAEAGHGDNWDQAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccactattcctgaaaatccattaattcttattgatggctcttcttacctctatcga
gcgtttcatgcctatcctggcaccatgagtaatggtgatatcccaaccaatgcggtctac
ggtgtggtgaacatgctgcgcagcatgatgcgtcagtttgcttctgatcgtattgcggtg
gtgtttgacgccaaaggcaaaacctttcgcgacgatatgtatccggaatataaggccaac
cgaccaccaatgccggacgatctgcgttgccaaatagaacctcttcatcaagttattaaa
gcaatggggcttcccttgattgctattgaaggtgttgaagcggacgatgtgattggtacg
ctggcctatcaagcttctcaacaagggatgccggtgctgatcagtaccggtgataaagat
atggctcagttagtggacgacaacattaccctaatcaacaccatgaccaatgtcgtgatg
gacagagaaggggtcattgagaaattcggtattccacctgaactgatcatcgattatctc
gcgttaatgggtgacaaggtcgataacattcctggcgtgcctggtgtgggtgataaaacc
gccacagctctgctgcaaggtattggtggtcttagtcagttgtacgaccatttggatgac
attgcggcactgagcttccgcggctcaaaaaccatggcgaagaagctggtggacaacaaa
gacaatgcgttgctgtcttatcagctagcgacgatcaagcttgatgttgcattgcaagaa
acgccagaatcccttttaaaaacagagccaaataaagatgagctgatcaagctctatggc
caactggcctttaaatcttggctcaatgagctactagaaggtggcactggtgttgttgaa
gcggatgaaaaagcacaaacctcggtacgcagtggcgcatctccggttgaaagtgaaatc
aacaatgctgcggcgaatattgaccgtagccaatatcaaaccatcttcgaccaagcgaca
ttcgacatttggttggacaagctgaaagcgtcagagctgtttgccttcgataccgaaacg
gacagccttgattacatggtcgctaacttagtgggcctgtcatttgctgtggcagaaggt
gaagctgcctatgtgcctgtcgcacacgattatctggatgctccggagcaacttgatcgc
gattgggtgctggctcaacttaagccactgctggaagatgatacgaaggcaaaagttggc
caaaacttgaagtacgatgcctcagtgctggctcgctatggtattgagatgaagggcatc
aagcacgacaccatgctggcttcttatgtgtacaacagcgtgggcggcaagcacgacatg
gatagcttggcactgcgcttcctacagcacagttgtatttcgtttgagcaattggctggc
aaaggcaagaatcagctgactttcaatcaaattgatctgaatgaagctgcggtttatgcc
gccgaagacgcggatgtcaccttgcgtttgcacaaccgcttgtttgccaatattgaacaa
gatgagaaactcaacgccatctatcaagagattgaagtgccattagtgccagtgttatca
cgtatggaacggactggtgtgttgattgatgacatgaaactgtctgcgcaatctcaagag
atcgctgtgcgcttgggagagttagagcaaaaagcgtatgaaatcgcaggccagccattc
aatatgaactcgccaaagcagctgcaaaccatcttgtttgagcaaatgggtttacctgtt
atcaagaaaacgccttcaggtaccccttctacagcagaagaagtgttgcaagaactcgcg
ttggattacccactgccgagcgtcattatggagtaccgtggcttagcgaagttgaaatcg
acttacaccgataagctgccgaaaatgattaacccacacacagggcgcgtgcatacgtct
taccatcaagccgtgacggctactggtcgtttatcgtcaaccgatccaaacttgcaaaat
attccaattcgtaatgaagaaggacgccgtattcgccaagcgttcgttgcgccacatggc
tataaaattcttgcggtcgactattcacagattgaattgcgtattatggcgcacttgtct
ggtgaccaagcactgcttgacgccttccagcaaggcaaagatatccatgcggcaaccgcg
gcagaaatcatgggcgtgtcgattgaacaagtctccagtgagcagcgtcgtcgagccaaa
gccgtcaactttggtcttatctatggcatgagtgcgtttggtttagcgaaacagcttgga
attccgcgtggtgaagcacaagcttatatggataaatatttcgagcgctaccctggtgtc
atgcagtacatggaagacacacgttcaaatgccgctcaacatggttatgttgaaaccatt
tttggtcgtcgtttgcatctaccggaaattacctctcgcaatgtgatgcgtcgtaaagca
gcagaacgtgcggcgatcaacgctccaatgcagggcactgcagcagacatcatcaagaaa
gcgatgttgttggtggatcagtggattcaagaggaaggcaatggtcgagtcaaattactg
atgcaagtacacgatgaactggtgtttgaagtggaagagtcctgtttgaccgaaattgaa
agtaaagtacaacaattgatggaatctgcagcacagttaaatgttcctttggtggcggaa
gctggccatggtgacaactgggatcaagcgcattaa
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integrated database retrieval system
