Vibrio vulnificus CMCP6: VV1_0943
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Entry
VV1_0943 CDS
T00108
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VV1_0943 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvu03019
]
VV1_0943 (recQ)
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_0943 (recQ)
Enzymes [BR:
vvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VV1_0943 (recQ)
Messenger RNA biogenesis [BR:
vvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VV1_0943 (recQ)
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VV1_0943 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AAO09440
UniProt:
A0A3Q0L2Z1
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All DBs
Position
I:complement(949776..951611)
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AA seq
611 aa
AA seq
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MTSTLLADPSDGSMTPQSVLSQVFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCY
QIPALVRPGITLVISPLISLMKDQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAGQLK
LVYVSPERVLMRDFIERLENLPLAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPF
MALTATADDATRKDILSRLHLNEPHVYLGSFDRPNIRYDLVEKHKPVSQVIRYLESQKGN
CGIIYCGSRKKVEMLTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFG
MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDEKDD
GPQKQVESHKLNAMSAFAEAQTCRRQVLLNYFGEYREKPCGNCDICLDPPKHFDATEEAR
KALSCVYRVNQSFGMGYVVEVLRGMQNIRIREHGHDKISTYGLGRDHSHDYWVSIFRQLI
HKGLLFQNITRNSTLQLTEEARPLLRGDMTLELAVPRLDTAARSAKADKLSNKHYDKKLF
AKLRKLRKSIADEEEIPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFL
DLIQEHITHYG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacttccacgctgcttgccgacccttccgatggctcgatgacgccccaaagcgtttta
tcacaggtgttcggctatcagaccttccgtgaggggcagcagtcggtgatcgaggcggct
gttgaggggaaagatagtttggtgatcatgcccaccggtggcggcaaatcgctgtgctat
caaattcctgctctggtacgcccgggtattaccttagtgatctcccctttgatttcgctg
atgaaagatcaggttgaccaacttaaagccaatggtgtcgcggcagaatgtgtcaactcg
accttatcacgtgacgctttgctcagcgtctacaaccgcatgcacgcgggacagctcaaa
ttggtgtacgtttcgccagagcgggtgttgatgcgcgactttattgagcggctggaaaat
ttgcccttggcgatgattgctgtcgatgaagcgcactgtatctctcagtggggacacgat
ttccgccccgagtacgccgcgttagggcaattgaagcatcattttcctcacgtgccgttt
atggcgctaacggccacggcagacgatgcgacgcgcaaagacattttaagtcgcttacat
cttaatgagcctcacgtttatctcggcagttttgatcgccccaacattcgttatgaccta
gtggagaagcacaagccggtctctcaagtgattcgctatttggaaagccagaaaggcaat
tgcggcattatttattgtggtagccgtaagaaagtcgaaatgctgaccgagaagctgtgc
aacaaccatattcgagcggcgggttatcacgctggtatggacgccgatgagcgcgcttat
gtgcaagaagcgtttcaacgagacgacatccagattgtggtggcgacagtggcctttggt
atggggatcaacaaacccaatgtgcgctttgtggtgcattttgatattccacgcaatatc
gaatcgtactatcaagagacgggtcgagcagggcgtgatggcctgcccgccgaagcaatg
atgctctacgatccggcagacatcacttggttgcgccgcatgttggatgagaaagacgac
ggcccgcaaaaacaagtggaaagtcataagctcaatgccatgagtgcctttgctgaggcg
caaacctgtcgccgccaagtgctgctgaactatttcggtgaataccgcgagaagccttgc
ggcaattgcgatatttgcttagacccgccgaagcattttgatgcgacggaagaagcacgc
aaagcgttgtcgtgtgtttatcgcgttaatcagagttttggtatgggctacgtagtggaa
gtgttgcgtgggatgcaaaacattcgtatccgggaacatggccacgataagatttcgacc
tacggtttagggcgtgatcacagccatgactattgggtgagcattttccgccaactgatc
cacaaagggctgctgtttcaaaacatcacccgcaattcgactttgcagttaactgaagaa
gcaaggccattgctgcgtggtgatatgacgttggagctggcggtgccacgtttagatact
gccgcgcgcagtgccaaagcagataagctatcgaacaaacattacgacaaaaagctgttc
gccaaattacgtaagctacgcaaatcgattgccgatgaggaagagatcccaccctatgtg
gtgttcagtgatgccacgctgatcgacatggctgaaatattgccgacttcatatggtgaa
atgctcgcggtgagcggcgtcgggcagcgcaaactagaaaaatacgcggatccgttttta
gatttgattcaggagcacatcactcattatggatga
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