Vibrio vulnificus CMCP6: VV1_1008
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Entry
VV1_1008 CDS
T00108
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvu03016
]
VV1_1008 (trmE)
Transfer RNA biogenesis [BR:
vvu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VV1_1008 (trmE)
Prokaryotic type
Methyltransferases
VV1_1008 (trmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Ras
ABC_tran
Gtr1_RagA
Roc
SRPRB
Arf
AAA_29
MCM
AAA_28
AAA_18
AlphaC_N2
DUF4702
Motif
Other DBs
NCBI-ProteinID:
AAO09496
UniProt:
Q8DDI1
LinkDB
All DBs
Position
I:1010458..1011846
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AA seq
462 aa
AA seq
DB search
MVVKTIGSFMTTDTIVAQATAPGRGGVGIIRVSGPQAAQVALEVTGKTLKARYAEYLPFK
AQDGSELDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILTISGVRPARPGEFS
ERAFLNDKMDLTQAEAIADLIDASSEEAAKSALQSLQGQFSKRIHTLVESLIHLRIYVEA
AIDFPEEEIDFLADGKVAGDLQAIIDNLDAVRKEANQGAIMREGMKVVIAGRPNAGKSSL
LNALSGKDSAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVEKIGIERAWDE
IRQADRVLFMVDGTTTDATDPKEIWPDFIDRLPEQIGITVIRNKADQTQESLGICHVSQP
TLIRLSAKTGQGVDALRNHLKECMGFSGNSEGGFMARRRHLDALQRAAEHLLIGQEQLEG
YMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttaaaacgataggctcatttatgacaacagatacgattgtcgcccaggctaca
gcgccgggccgaggtggtgtcgggattattcgtgtttctggcccgcaagccgctcaagtt
gccttggaagtaacaggtaagacgctaaaagcgcgctacgctgaatatctcccttttaaa
gcccaagatggtagtgaacttgaccaagggatcgccctgttcttcccaaatcctcattca
tttactggcgaagatgtccttgagttgcaaggccacggcggccctgtggtgatggacatg
ctgattaaacgcatcctgaccatctctggtgttcgccccgcaagaccaggggagttttct
gagcgagccttccttaacgataagatggacctcacgcaagctgaggcgatcgcagacctg
attgatgccagctccgaagaagcggccaaatcagcactccaatcgctacaagggcaattt
tctaagcgaattcatacgctggtggaatctctcatccatctgcgcatctacgttgaagcg
gccatcgattttcctgaagaggaaatcgacttcttagccgatggtaaagtggcgggcgat
ctgcaagccatcatcgacaacttagacgcagtacgcaaagaagccaaccaaggcgcgatt
atgcgtgaagggatgaaagtggtgattgcgggtcgaccaaatgccggtaaatcgagcttg
ttgaatgcgctatcaggtaaggattccgcgattgtcaccgacattgctggcaccacacgt
gatgtcctccgtgagcatatccatatcgatggcatgccattgcacatcatcgataccgct
ggtctgcgtgatgcttcagacgaagtagaaaaaatcggtatcgagcgcgcttgggatgag
atccgtcaagccgatcgcgtactcttcatggtcgatggcaccaccaccgacgccaccgac
cctaaagaaatctggccagactttattgatcgcctgccagaacaaatcggcattaccgtg
atccgcaacaaagcggatcaaacccaagaatcactcgggatctgccatgttagtcaaccg
acgttgatccgtttgtcggccaaaacaggtcaaggcgttgatgcattgcgtaatcaccta
aaagagtgcatgggcttttctggcaacagtgaaggtggctttatggcaagacgccgacat
ctggatgcacttcagcgcgccgcagagcacctgctgattggccaagaacaattggaaggg
tatatggccggagaaattcttgcagaagaactccgcatcgctcagcagcatctcaacgag
atcacgggcgagtttagttccgacgatttgctcggacgtattttctcttcattctgtatc
ggaaaataa
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