Vibrio vulnificus CMCP6: VV1_1010
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Entry
VV1_1010 CDS
T00108
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvu03016
]
VV1_1010 (gidA)
03036 Chromosome and associated proteins [BR:
vvu03036
]
VV1_1010 (gidA)
Transfer RNA biogenesis [BR:
vvu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VV1_1010 (gidA)
Prokaryotic type
VV1_1010 (gidA)
Chromosome and associated proteins [BR:
vvu03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
VV1_1010 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
Thi4
NAD_binding_9
Pyr_redox_3
AlaDh_PNT_C
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AAO09498
UniProt:
Q8DDH9
LinkDB
All DBs
Position
I:1012797..1014695
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AA seq
632 aa
AA seq
DB search
MLYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTL
FQQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPS
IALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQI
PCFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPE
GLTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETK
FIQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTM
GTKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRL
KSTWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEAAE
QVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETLGI
ASRISGITPAAISILLVHLKKIGMLKVGEENA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcacgaaacatttgacgtcattgttgtcggtggcggacacgcaggaacggaa
gccgcactcgcatcagcacgcaccggtcagaagaccttattactcacgcacaatatcgat
accttgggccaaatgtcttgtaacccagccattggtggtattggtaaagggcatttggtc
aaagaagtggatgcgatgggtggtttgatggcgcaagcgatcgatcacgcgggtattcag
tttagaacactaaacgcctcgaaagggccagcagtgagagcaacacgtgcacaagccgac
cgagcgctttacaaagcttacgtgcgtgattttctcgaaaatgcgccgaatctgaccctt
ttccaacaagcagtggatgacttaattgtcgaacaggatcaagttcgtggtgtgatcacg
caaatgggattaaagttccatgccaaagcggtcgttctgacggtaggtactttccttggt
ggaaagatccacatcggtttgcaaagctcttctggtggacgcgcaggggatcctccttcg
atcgcgttggccgatcgtctgcgtgaactgccatttagagtcgatcgactcaaaacgggt
acaccaccacgcatcgatgcacgtagtgtcgatttttctgtgttagaagcacaacacggt
gacaatccaacgcctgtattctcctttatgggcgatcgcactcatcacccacgtcaaatt
ccttgtttcattacccataccaatgaacagacgcatgaggtgattcgtaacaaccttgat
cgtagcccaatgtacgctggtatcatcgaaggtattggccctcgttactgtccttctatc
gaagacaaagtgatgcgctttgccgataagaacagccaccaaatcttcatcgaaccagaa
ggtttaacgactcacgaattgtatccaaacggcatctccaccagcttgccatttgatgtg
caggtgcagattgttcgttcgatgaaaggttttgaaaacgcgcacattgttcgccctggt
tacgcaattgaatacgatttcttcgatccacgtgacttgaaacagacttacgaaaccaag
tttatccaaggtttgttctttgctggccaaattaacggcacgactggttacgaagaagca
gccgcacaaggtttgatggcgggtctcaatgccagcttgttcagccaagagaaagaaggt
tggagcccacgtcgcgatcaagcctacatgggcgtattgatcgacgatctctcaaccatg
ggtaccaaagaaccataccgcatgttcacatcgcgtgcggaacaccgcttgttactgcgt
gaagacaacgcggatctacgtttgacagaaaaagcacgcgaactcggcttggtcgatgat
gctcgttgggctcgttttaaccagaagatcgacaatatggagcaagagcgtcaacgtctg
aaatcgacgtggatgaatccggcttctactggtattgaagagcttaaccaattattaaaa
tcaccaatgaaccgtgaagccagcggtgaagatcttcttcgtcgcccagagatgacttat
gagcagctcacttcgttggccgcttttgcacctgcactcgacgatcttgaagccgcagaa
caagtggaaattcaagtgaaatacgaaggctacatcaagcgtcagcaagatgagattgaa
aaatccctgcgtcatgaacacaccaaattgccagcggatcttgattacagcgatgtgaaa
ggcttatccaacgaggtggtacttaaactcaacaccgccaagcccgagacattggggatt
gcatcacgcatttctggtattacgcctgcggccatttcgattttgctggttcacttaaag
aaaatcggcatgttgaaagtgggagaagaaaacgcatga
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