Vibrio vulnificus CMCP6: VV1_1171
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Entry
VV1_1171 CDS
T00108
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvu03016
]
VV1_1171 (trmA)
Enzymes [BR:
vvu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VV1_1171 (trmA)
Transfer RNA biogenesis [BR:
vvu03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VV1_1171 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
PrmA
Methyltransf_15
Methyltransf_12
DREV
DUF6579
Motif
Other DBs
NCBI-ProteinID:
AAO09642
UniProt:
Q8DD43
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All DBs
Position
I:complement(1164434..1165543)
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AA seq
369 aa
AA seq
DB search
MATLDVNPQRYQQQLAEKVQRLTDMFAPYQAPELEVFESPDQHYRMRAEFRVWHEGEEMY
YIMFNQETREKYRVDQFPAASRLINDLMPLLIDAMKDNESLRRKLFQVDFLSTLSGEILV
SLLYHRQLDDAWIENAKALKQRLNDEGFNLNLIGRARKMKIVLDRDYVVEKLDVNGKPYT
YQQVENSFTQPNGKVAEKMLEWAVDCTQESQGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANKIENVQIIRMSAEEFTEAMEGKREFRRLKDNGIDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYERILYISCNPETLKENLDILSETHHITRFALFDQFPYTHHME
AGVMLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgatgtaaacccacaacgctatcagcaacagttagcagaaaaagtgcaa
cgcttaaccgatatgttcgcaccttatcaagcccctgagctggaagtgtttgagtctcca
gatcagcactatcgcatgcgcgctgagttccgcgtttggcatgaaggggaagagatgtac
tacatcatgttcaaccaagagacgcgtgaaaaataccgtgttgaccagtttccggcagca
agccgcttgatcaacgatctcatgcctttgctgattgacgcgatgaaagacaatgagtcg
ctacgtcgtaaactgttccaagtcgatttcctttccactctgagcggcgagattctggtt
tctttgctttaccatcgccaattggatgatgcttggattgaaaatgctaaagctttaaaa
cagcgcctgaatgacgaagggtttaacctcaacctcattggtcgcgcacgtaaaatgaag
atcgtcctagaccgtgattacgtggtcgaaaagctcgacgtcaacggcaagccttacacc
taccaacaagtagaaaacagctttactcaaccgaacggcaaagtcgcagagaaaatgttg
gaatgggcggtcgattgtacccaagaaagccaaggcgatttattggagctttactgtggt
aacggcaatttctcccttgcgctggcgcaaaattttgagcgcgtgttggccacggaattg
gcaaagccatcggtggaatcggcgcaatacaatatcgctgcgaacaagattgagaatgtg
caaatcatccgcatgtcagctgaagagtttaccgaagcaatggaagggaagcgtgaattc
cgtcgcctgaaagacaatggcatcgatctcaagagttataactgcaacaccatttttgtt
gatccaccacgctctggcatggatgtagacacttgtaaaatggtgcaaggttacgagcgt
attttatacatctcttgcaacccagagacattaaaagagaacttagacattctgagcgaa
acacaccacatcacgcgctttgctctgttcgatcagttcccgtacacccaccacatggaa
gcgggtgtgatgctagagcgtaaagcctaa
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