Vibrio vulnificus CMCP6: VV1_1238
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Entry
VV1_1238 CDS
T00108
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03030
DNA replication
vvu03430
Mismatch repair
vvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV1_1238
03430 Mismatch repair
VV1_1238
03440 Homologous recombination
VV1_1238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvu03032
]
VV1_1238
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_1238
Enzymes [BR:
vvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV1_1238
DNA replication proteins [BR:
vvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV1_1238
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV1_1238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AAO09695
UniProt:
A0A3Q0L3F5
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All DBs
Position
I:complement(1217759..1218394)
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AA seq
211 aa
AA seq
DB search
MNWFRRNYWYYRLKGSPYQSLFCAPNNKEYVSLDCETTSLDPNRAELVTIAATKIIDNRI
ITSKPFEVRLRAPQSLDSGSVKIHKIRHQDLVDGLSEKEALLKLIDFIGNRPLVGYHIRY
DKKILDLACLRHLGFPLANPLVEVSQIYHDKLEKHLPNAYFDLSLDAICRHLDLPIQDKH
DALQDAIAAALVFVRLTRGDLPSLSLPYASS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtttcggcgcaactactggtactaccgattgaaaggctcgccctatcagtcg
ctgttttgtgcgccaaacaataaagagtatgtctctctcgactgtgaaaccaccagcctt
gaccccaaccgcgcagaactcgtcaccattgccgcgaccaagatcatcgacaatcgcatc
atcaccagtaaaccgttcgaggtgcgtttgcgtgcgccacagtctctcgattctggttca
gtgaaaattcacaagatccgccaccaagacttggtcgatgggttgagcgagaaagaagca
ctgctcaaactgattgatttcatcggtaatcgccccttggtgggctaccacatccgctac
gataagaagatcctcgatttagcctgcttacgccacctcggttttcccttggccaatcca
ctggtggaagtcagccagatctaccatgacaagctggaaaaacatctacccaacgcctat
ttcgatttgagtttggacgccatttgtcgccatctcgacttgcccatccaagacaaacac
gatgcgctgcaagatgccattgccgcggctttggtgtttgtgcgactcactcgtggcgat
ttgccgagcctgtcattgccctatgcttcttcgtga
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