Vibrio vulnificus CMCP6: VV1_1432
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Entry
VV1_1432 CDS
T00108
Name
(GenBank) MSHA biogenesis protein MshH
KO
K18765
RNase E specificity factor CsrD
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvu03019
]
VV1_1432
Messenger RNA biogenesis [BR:
vvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VV1_1432
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
PriCT_2
Motif
Other DBs
NCBI-ProteinID:
AAO09872
UniProt:
A0A3Q0L3L2
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Position
I:1413716..1415719
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AA seq
667 aa
AA seq
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MFMRYTPTLKLSTRLVAFVTMIVISAMFILFIGGTLSFKKLGQEYLNHYLAGIVEVLDKE
MEDPDAAYSMQRWMPKMLQASNIVEMKLSTDSGVVYRFKDTSPQIDVNRLYEQSYVLQRN
PGYRVEFKATPPYVGFGYSFQALWSITLAVGLIIFCLMRGVKWLKEQLYGSELLEERGRM
ILAGRVEQYAKGDEREWPYTASEALDMLIEELRDARQERSRFDTFIRTQTFLDKLTGTAN
RVLFDNKLESALHESGAQGAVLLMRIADWKSVSEENDKQMADEFVIEVGSLISNLVQRFP
EVVFSRYYPSDFALFIPHLGAKDVANLASQCIRQLEKLNPPYPLDKENWCHIGVTMYQEG
ERHSQIMDEAETALRSAQLQSNNNWSRFKKWNHIDETRGSVKWRTIFETAMSTENVLVFG
QLSYLLDGQQLNPLHTELTCRIVDPENGIVKASRYMSALKQVGFESQMDRAVIGKVFAHL
RANSENIGKLSLNLHVTPFANRHYFKWFRDELLQLPSEYRTKLSFEFVESHLVRHLDYMR
PVAKMLSGLGCQLVVGQAGRTIVSTHYLKDLGVDYLKLHRSLTKKIEQRHENQLFVRSML
GAGAGTKVKVIAVGVETKQEWSTLVELGIHGGQGRYFSVENQWLPPVVTTVEEKQTKTAR
RNRWRRK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgttcatgaggtataccccgactctcaaactcagtactcgacttgtagccttcgttaca
atgatcgttatcagtgccatgtttatcctctttattggtggcactctctcatttaaaaag
cttggtcaggaatatctcaaccactatttggcgggcattgtcgaagtgttggataaagag
atggaggatcctgatgccgcatattctatgcagcgttggatgccgaaaatgctgcaagct
tccaatatcgtagaaatgaagctttctaccgattctggggtggtctaccgtttcaaggac
acctcgccacaaattgacgtcaatcgcctttatgaacaaagttatgtgcttcagcgtaat
cccgggtatcgcgtcgagttcaaagcgacaccgccttacgttggctttggttattcgttt
caagcgttgtggtcgattaccttagcggttggcttgatcattttttgtttaatgcgtggt
gtgaaatggctgaaagagcagctatatggctcagagctattggaagagcgcggacgcatg
attctggcaggacgagtggaacaatacgccaaaggtgacgagcgagagtggccttacacg
gcaagtgaagcgttagacatgctgattgaagagctgcgcgatgcacgtcaagagcgcagt
cgctttgatacgtttattcgtacccaaacttttctggataaattgacgggcacggcgaat
cgggtgttatttgacaataaactggaatcggcgctgcatgagagtggggcgcaaggtgcg
gtgttattgatgcgcattgcggattggaaaagtgtgtcagaagaaaatgacaaacaaatg
gccgatgaatttgttattgaagtgggcagcctcatttccaatttggttcagcgttttcct
gaagtggtcttctcacgctattacccgtccgacttcgctctctttatccctcatttaggt
gccaaagacgtcgccaatctggcgtcgcagtgcattcgtcagctggagaaactcaatccc
ccttacccactggataaagaaaactggtgtcacattggtgtcactatgtatcaggagggg
gaacgacacagccaaattatggatgaagcggaaaccgcactgcgaagtgctcaattacag
agcaataataactggagtcgatttaagaagtggaatcatattgatgaaacaagaggtagt
gtgaagtggcgtaccatttttgagacagccatgtcgactgaaaatgtgctagtcttcgga
caattgtcttatttattagacggacagcagttaaatccattgcatactgagttaacatgt
cgaattgttgatccagaaaacggcattgtgaaagcctctcgctatatgtctgcgttaaag
caggttgggtttgagagtcaaatggaccgcgcggtcatcggcaaagtgtttgctcatttg
cgtgcaaattctgagaatatcggcaaattgtcactgaatttacacgtcacgccgtttgcc
aaccgtcattatttcaaatggttccgagacgaactgctacagttacctagtgagtatcga
acaaaattgagttttgagtttgttgaaagtcacttagtaaggcatctggattatatgaga
cctgtggcaaaaatgttgtcaggtttggggtgccaactggtggtcgggcaagctggtaga
accattgtgagtacgcattatttgaaagatttgggtgtggattacttaaaattacatcga
agtctgacaaagaaaatagaacaacgccatgaaaaccagttgtttgttcgtagtatgctg
ggcgcgggcgcagggacgaaagtgaaagtcattgcggttggcgttgaaaccaagcaagag
tggtcaaccttggttgagctaggcatacatggtggacaagggcgctatttctccgttgaa
aatcagtggttaccgccagtcgtgaccactgtggaagaaaaacaaacgaaaacggcaaga
cgcaatcgctggcgtcgaaaataa
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