KEGG   Vibrio vulnificus CMCP6: VV1_1432
Entry
VV1_1432          CDS       T00108                                 
Name
(GenBank) MSHA biogenesis protein MshH
  KO
K18765  RNase E specificity factor CsrD
Organism
vvu  Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:vvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvu03019]
    VV1_1432
Messenger RNA biogenesis [BR:vvu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     VV1_1432
SSDB
Motif
Pfam: EAL GAPES4 GGDEF PriCT_2
Other DBs
NCBI-ProteinID: AAO09872
UniProt: A0A3Q0L3L2
LinkDB
Position
I:1413716..1415719
AA seq 667 aa
MFMRYTPTLKLSTRLVAFVTMIVISAMFILFIGGTLSFKKLGQEYLNHYLAGIVEVLDKE
MEDPDAAYSMQRWMPKMLQASNIVEMKLSTDSGVVYRFKDTSPQIDVNRLYEQSYVLQRN
PGYRVEFKATPPYVGFGYSFQALWSITLAVGLIIFCLMRGVKWLKEQLYGSELLEERGRM
ILAGRVEQYAKGDEREWPYTASEALDMLIEELRDARQERSRFDTFIRTQTFLDKLTGTAN
RVLFDNKLESALHESGAQGAVLLMRIADWKSVSEENDKQMADEFVIEVGSLISNLVQRFP
EVVFSRYYPSDFALFIPHLGAKDVANLASQCIRQLEKLNPPYPLDKENWCHIGVTMYQEG
ERHSQIMDEAETALRSAQLQSNNNWSRFKKWNHIDETRGSVKWRTIFETAMSTENVLVFG
QLSYLLDGQQLNPLHTELTCRIVDPENGIVKASRYMSALKQVGFESQMDRAVIGKVFAHL
RANSENIGKLSLNLHVTPFANRHYFKWFRDELLQLPSEYRTKLSFEFVESHLVRHLDYMR
PVAKMLSGLGCQLVVGQAGRTIVSTHYLKDLGVDYLKLHRSLTKKIEQRHENQLFVRSML
GAGAGTKVKVIAVGVETKQEWSTLVELGIHGGQGRYFSVENQWLPPVVTTVEEKQTKTAR
RNRWRRK
NT seq 2004 nt   +upstreamnt  +downstreamnt
gtgttcatgaggtataccccgactctcaaactcagtactcgacttgtagccttcgttaca
atgatcgttatcagtgccatgtttatcctctttattggtggcactctctcatttaaaaag
cttggtcaggaatatctcaaccactatttggcgggcattgtcgaagtgttggataaagag
atggaggatcctgatgccgcatattctatgcagcgttggatgccgaaaatgctgcaagct
tccaatatcgtagaaatgaagctttctaccgattctggggtggtctaccgtttcaaggac
acctcgccacaaattgacgtcaatcgcctttatgaacaaagttatgtgcttcagcgtaat
cccgggtatcgcgtcgagttcaaagcgacaccgccttacgttggctttggttattcgttt
caagcgttgtggtcgattaccttagcggttggcttgatcattttttgtttaatgcgtggt
gtgaaatggctgaaagagcagctatatggctcagagctattggaagagcgcggacgcatg
attctggcaggacgagtggaacaatacgccaaaggtgacgagcgagagtggccttacacg
gcaagtgaagcgttagacatgctgattgaagagctgcgcgatgcacgtcaagagcgcagt
cgctttgatacgtttattcgtacccaaacttttctggataaattgacgggcacggcgaat
cgggtgttatttgacaataaactggaatcggcgctgcatgagagtggggcgcaaggtgcg
gtgttattgatgcgcattgcggattggaaaagtgtgtcagaagaaaatgacaaacaaatg
gccgatgaatttgttattgaagtgggcagcctcatttccaatttggttcagcgttttcct
gaagtggtcttctcacgctattacccgtccgacttcgctctctttatccctcatttaggt
gccaaagacgtcgccaatctggcgtcgcagtgcattcgtcagctggagaaactcaatccc
ccttacccactggataaagaaaactggtgtcacattggtgtcactatgtatcaggagggg
gaacgacacagccaaattatggatgaagcggaaaccgcactgcgaagtgctcaattacag
agcaataataactggagtcgatttaagaagtggaatcatattgatgaaacaagaggtagt
gtgaagtggcgtaccatttttgagacagccatgtcgactgaaaatgtgctagtcttcgga
caattgtcttatttattagacggacagcagttaaatccattgcatactgagttaacatgt
cgaattgttgatccagaaaacggcattgtgaaagcctctcgctatatgtctgcgttaaag
caggttgggtttgagagtcaaatggaccgcgcggtcatcggcaaagtgtttgctcatttg
cgtgcaaattctgagaatatcggcaaattgtcactgaatttacacgtcacgccgtttgcc
aaccgtcattatttcaaatggttccgagacgaactgctacagttacctagtgagtatcga
acaaaattgagttttgagtttgttgaaagtcacttagtaaggcatctggattatatgaga
cctgtggcaaaaatgttgtcaggtttggggtgccaactggtggtcgggcaagctggtaga
accattgtgagtacgcattatttgaaagatttgggtgtggattacttaaaattacatcga
agtctgacaaagaaaatagaacaacgccatgaaaaccagttgtttgttcgtagtatgctg
ggcgcgggcgcagggacgaaagtgaaagtcattgcggttggcgttgaaaccaagcaagag
tggtcaaccttggttgagctaggcatacatggtggacaagggcgctatttctccgttgaa
aatcagtggttaccgccagtcgtgaccactgtggaagaaaaacaaacgaaaacggcaaga
cgcaatcgctggcgtcgaaaataa

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