Vibrio vulnificus CMCP6: VV1_1574
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Entry
VV1_1574 CDS
T00108
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvu03009
]
VV1_1574 (rumA)
Enzymes [BR:
vvu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VV1_1574 (rumA)
Ribosome biogenesis [BR:
vvu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VV1_1574 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_23
RrnaAD
PrmA
Methyltr_RsmB-F
PCMT
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AAO09998
UniProt:
Q8DC67
LinkDB
All DBs
Position
I:1546334..1547650
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AA seq
438 aa
AA seq
DB search
MARFFQPKKKLQPESKHQQVLVEKLDHQGAGIAYLNKKPLFIDGTLPGEEVVTQLTESKS
KFARGKLIKLLKPAAERVEPFCSHFNQCGGCDMQHMDYQAQLAYKQRTLLQLMKKFSGSE
ILLSPPVTGLEKAYRRRARVSLMWDKKSRQLQFGFRRKQSKQIENVTQCPVLVAELECLL
PELKAILSHFQHPEHLGHVELVAADNGAVITLRHTGPLLDEDVAKLRQCAEQHQATLYLM
PASDQLERISGEAPYYQEIGFKVPFEPNNFIQVNQKVNQQMVVQALEWLDPQSSDRVLDL
FCGLGNFSLPIASKAKSVTGVEGVDEMVQKAAINASLNQINNAQFFHANLEQDFVGQPWA
SEKFDKILLDPARAGASGIIEQVSALGAKRVVYVSCNPATLARDSQSLLEQGYRLTKLGM
LDMFPYTSHLESMALFEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttttccaaccgaaaaagaaacttcaacccgaaagcaaacatcagcaggtg
ttggtggaaaaactcgaccatcaaggggcggggattgcctatctcaacaaaaagccactt
tttattgatggcactttaccgggggaagaggtggtgacgcagctgacggagagtaaaagt
aagtttgcgcgcggtaaactgatcaaattgctcaaaccagcggcggaacgtgttgaacca
ttctgttctcattttaatcagtgtggtggttgcgacatgcagcacatggattaccaagct
caactggcttataagcagcgcactctgctgcaactgatgaagaaattttccggcagtgag
atccttttatcaccaccagtaacggggcttgagaaggcgtatcgtcgtcgtgcgcgcgtc
agcctgatgtgggacaaaaaatcgcgccagttgcagtttggattccgccgtaaacagagc
aagcaaatcgaaaacgttactcagtgcccggtattagtggctgagcttgagtgtttgttg
ccagaactgaaagcgatcttgagccatttccaacatcctgaacacttaggccatgttgaa
ctggttgcggcagataacggtgcggtcatcacgcttcgacatacaggcccattgttggat
gaagacgtggctaagctacgtcaatgtgcagaacaacatcaagccacgctgtaccttatg
cccgcaagcgatcagctcgagcgtatttctggcgaagcgccgtactaccaagaaattggc
tttaaagtgccatttgagccaaacaactttattcaggtgaaccaaaaggtaaaccaacag
atggtggttcaagcgcttgagtggttagacccgcaaagcagcgaccgtgtgttagatctc
ttctgtggtctaggaaattttagcttgccgatcgccagtaaagctaagtcggtgactggg
gtggaaggggtggacgaaatggtgcaaaaagcagcaatcaacgcctctttgaaccaaatc
aataacgcgcaatttttccacgctaatctggagcaggattttgttgggcagccttgggcg
agcgagaagtttgataagattttactcgatcctgcaagggctggcgcaagcggtatcatc
gagcaggtttccgcactcggtgcgaaaagagtggtttatgtttcgtgtaatcctgctacc
cttgcaagggatagccaaagcctgttggagcaaggttatcgcttaaccaaattaggtatg
ttggacatgttcccttataccagtcaccttgaatcgatggcgttgtttgaaaaataa
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integrated database retrieval system
