Vibrio vulnificus CMCP6: VV1_1698
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Entry
VV1_1698 CDS
T00108
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvu03016
]
VV1_1698 (truB)
Enzymes [BR:
vvu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VV1_1698 (truB)
Transfer RNA biogenesis [BR:
vvu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VV1_1698 (truB)
Prokaryotic type
VV1_1698 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AAO10114
UniProt:
Q8DBV8
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All DBs
Position
I:1682527..1683471
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AA seq
314 aa
AA seq
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MARRRKGRPIDGVILLDKPTGMSSNDALQKVKRLYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGDVVETRPVNVTLETLEACIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEITLHRFEGEEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYENMVTLEQLNELVDNANRDGVAPREVLDPLL
MPMDTAVEDLPEVNLIADLADMVMHGQAVQVLGAPTEGQLRLTMGEERRFIGVGEMNRDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgcccgattgatggtgttatcttattagataaaccaaca
ggaatgtcatctaacgatgctttgcaaaaagtaaaacgtctttacttcgctgaaaaagcc
ggccatacaggcgcgcttgaccctttggcgacgggtatgttgccaatctgccttggtgaa
gcgacaaagttttctcagttcttgctcgactcagataaacgctatcgagtgattgccaag
ctaggtgagcgcaccgacacttcagattctgacggcgacgtagtggaaacgcgccctgtt
aacgtgacgcttgagaccctagaagcgtgtattgagaaattccgtggcgaatctgatcaa
gtcccctcgatgttctcagcattgaaatatcaaggtaagcctttatatgaatatgcacgt
aaaggcattgaggtgccacgtgagtctcgtaagataaccgtctatgagatcactcttcac
cgctttgaaggtgaggaagtggaaatggaagtgcattgctcaaaaggtacttacattcgc
acaatcgtcgacgatctaggtgaaatgcttggctgtggtgcccacgtaaccatgctacgt
cgtacaggtgttgcaaaatacccttatgaaaacatggtgaccttagagcagcttaatgaa
ttggttgataacgccaatcgtgatggtgttgcaccacgtgaggtgttggatccactgctg
atgccgatggataccgcagttgaagatttgccagaagtgaatctgatcgcggatctagcc
gatatggtgatgcatggccaagctgttcaagtcttgggtgcgcctacagaaggccaactc
agactgaccatgggtgaagaaagacgctttatcggtgtcggtgaaatgaatcgcgatggg
aaaattgcaccaaaacgtttggtggtttttcgcgacgaagagtag
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