Vibrio vulnificus CMCP6: VV1_1875
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Entry
VV1_1875 CDS
T00108
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03030
DNA replication
vvu03430
Mismatch repair
vvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV1_1875
03430 Mismatch repair
VV1_1875
03440 Homologous recombination
VV1_1875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvu03032
]
VV1_1875
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_1875
Enzymes [BR:
vvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV1_1875
DNA replication proteins [BR:
vvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV1_1875
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV1_1875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AAO10277
UniProt:
A0A3Q0L4I5
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All DBs
Position
I:1869035..1872514
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFVHLRIHSDFSMVDGINKVPALVKQVAALGMPAMALTDFTNLCGLVKFYGAAHGN
GIKPIIGADFKMQSPEFGDELTQLTVLAADNTGYKNLTLLISKAYLRGHVQHQPVIDKEW
LIELSEGLIILSGARNGEIGKALLKGNQKLVESCVDFYQQHFADRFYVELIRTGRSDEET
YLHFAIELAEQYDLPVVATNEVVFIGQELFDAHEIRVAIHDGYTLEDPRRPKNYSPQQYL
RTEEEMCELFADIPEALENSVEIAKRCNVTVRLWEYFLPAFPTEGMAETEFLVMKSKEGL
EERLEFLFPDPEIRAQRRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFKAEPA
LPELYEADEEVKELIDMCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGNFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEREGKAPVRIESIPLDDPASFRIL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRATFEEGAVKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECFRMKLTVLPPDINSGLYRFNVDENGAIVYGIGAIKG
VGEGPIDAILEARTKGGHFKDLFDFCARIDLKKVNKRVIEKLIYAGALDRLGPHRAALMA
SLDDAVKAASQHHQAEAFGQADMFGVLTDAPEEVEHKYIQVEPWPEKVWLEGERETLGLY
LTGHPVNAYLTELNKYTSCRLKDATPTRRDQSLTLAGLVIAARVMTTKRGTRIGIMTLDD
RSGRMEVMLFSDALERYADLLEKDKILVVSGQVSFDDFNGGLKMTAREVMDLGSAREKYA
RGVSVSIAASQIDDQFFERFSRILEPHKAGTIPVNVYYQRADARARLTLGTEWRVTPSDT
LLDELKMLLGKDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccaaaatttgttcacctgcgaatacacagtgatttttcaatggtggatggc
atcaataaagttccggctctggtcaaacaggtggcggcgctcggtatgcctgcaatggcg
ctgacagactttaccaacctatgtggcttggtgaaattttatggcgcagcccatggtaac
ggcattaagcctatcattggtgctgatttcaaaatgcaatcgcccgaatttggcgacgaa
ctcacccagctaaccgtcttggcggcagataataccggctacaaaaacctgaccctgctg
atttccaaagcctacttgcgaggtcatgttcaacatcaacctgtcatcgataaagagtgg
ttgattgagctatcagaaggattgatcatcctttcaggtgcacgtaacggtgaaataggt
aaagcactgctgaaaggcaatcaaaaattggtcgaaagctgtgttgatttttatcagcaa
cattttgccgatcgcttttatgtggagttgatccgtaccggtcgttctgacgaagaaacc
tacctgcattttgccatcgaactggcagagcaatacgatctccctgtggtggccactaac
gaagtagtctttattggacaagagctgttcgacgctcacgaaattcgcgttgcgattcat
gatggctatacgttagaagatccacgtcgccctaaaaattacagccctcagcaatattta
cgcaccgaagaagagatgtgcgagctgtttgccgatattcctgaagcgcttgaaaacagt
gttgagatcgccaagcgctgcaacgttactgtgcgtctttgggaatatttccttcctgcg
tttccaaccgaagggatggcagaaaccgagttcttggtgatgaaatccaaagagggcttg
gaagagcgtctcgagtttcttttccctgatcctgagattcgcgcgcaacgtcgtcctgag
tatgacgaacgtttgcaggtcgaactcgatgtgattaaccaaatgggcttcccgggttac
ttcctgatcgtaatggagtttatccagtggtcgaaagacaacggtattcctgttggccct
ggccgtggttctggtgcgggttcgctggtggcctacgcattgaaaatcaccgaccttgat
ccgttggaatatgatctgctgttcgaacgtttcttgaacccagaacgtgtatccatgccc
gatttcgacgtcgacttctgtatggataaacgtgaccaagtgattgaccacgtggccgaa
atgtatggccgagatgcggtatcacagatcatcactttcgggaccatggcagccaaagct
gttattcgcgatgtgggccgagtacttggccacccgtttggttttgttgatcgcatttca
aaattggtgccacccgatccaggtatgacgctggaaaaagcatttaaggcggaacctgca
ttacctgagctgtatgaagctgatgaggaagtgaaagagctcatcgacatgtgccgcatt
ttggaaggctgtacacgaaatgccggtaagcacgcgggtggggtggtgatctctccaacc
acgatcaccgattttgcgccgatttacgccgatgcagaaggtaacttccccgttactcag
tttgacaaaaacgacgttgaaaccgccggtttggttaagtttgacttcttgggactgcgc
acgttaaccattattgactgggcgttaggtttgattaacccgcgcttagagcgtgaaggc
aaagcgccagttcgcatcgagtcgatcccgctcgacgatccggcatcgttccgtatattg
caaaactcggaaacgacagcggttttccagcttgaatcgcgcggcatgaaagagctgatc
aaacgccttcagccggactgttttgaagacatcatcgcactggtggcgctgttccgtccg
gggccgttgcaatcgggcatggtagataactttatcgaccgtaaacatggccgagaagcc
atctcttacccggatgagaagtggcaacatgagtcgttaaaagagattcttgacccaacc
tacggcatcatcctgtatcaagaacaggttatgcaaatcgctcaggtactctctgggtat
acccttggtggtgcggacatgctgcgccgtgctatgggtaagaaaaaaccagaagagatg
gccaagcagcgcgctacctttgaagaaggcgcggtgaaaaatggcatcgatggcgagttg
gcgatgaaaatcttcgacttggtagagaaatttgcgggctacggtttcaacaaatcgcac
tctgctgcctacgctttggtgtcatatcaaaccctttggctgaaaacgcattatccagcc
gagttcatggccgcggtaatgaccgcagatatggacaacactgaaaaagtggttggcttg
gtggacgaatgtttccgcatgaaactcacggtactaccaccggatattaactcaggtctg
taccgtttcaacgtggacgaaaatggcgcaattgtttacggtattggcgcgatcaaaggg
gttggtgaaggcccgattgatgcgattctcgaagcgcgtaccaaaggtgggcacttcaaa
gacttgtttgacttctgtgcgcgcattgacttgaagaaagtcaacaagcgtgtgattgag
aaactgatttacgcaggtgcgttggaccgacttggcccgcatcgtgctgcattaatggcg
tcattggatgacgcggtgaaagcggcgagccaacaccatcaagcggaagcatttggccaa
gccgatatgtttggtgtattgaccgatgcgccggaagaggtggaacacaaatacattcaa
gtggaaccttggccagaaaaagtgtggcttgaaggggaacgtgaaacgctgggcctttat
ttgacagggcacccagttaatgcgtatctcacggaactcaataagtacaccagttgtcga
ttaaaagacgccaccccaacgcgtcgtgatcaatcactgacactggctggcttagtgatc
gccgcccgtgtgatgaccaccaagcgtggtacgcgtatcggtatcatgacattggatgat
cgcagcggtcgtatggaagtgatgttgttctcagatgcgttagaacggtatgcagatcta
ctggaaaaagataaaatcttggtggtttctggacaggtcagctttgatgacttcaatggt
ggccttaaaatgacggctcgcgaagttatggacctcggttctgcgcgtgaaaaatacgcc
agaggggtgtctgtttcgattgccgcatcacagattgatgaccagttttttgagcgcttt
agtcggatcttagaaccgcataaagccggaacgattcctgtcaatgtatactaccagcgt
gccgacgccagagcgcggttaacattgggcacggaatggcgagtaacgcctagtgataca
ttacttgatgaattaaaaatgttgcttggtaaagaccaggtagaactcgaatttaactaa
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