Vibrio vulnificus CMCP6: VV1_1916
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Entry
VV1_1916 CDS
T00108
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu00300
Lysine biosynthesis
vvu01100
Metabolic pathways
vvu01120
Microbial metabolism in diverse environments
vvu01230
Biosynthesis of amino acids
Module
vvu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VV1_1916 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vvu01002
]
VV1_1916 (dapE)
Enzymes [BR:
vvu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
VV1_1916 (dapE)
Peptidases and inhibitors [BR:
vvu01002
]
Metallo peptidases
Family M20
VV1_1916 (dapE)
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Ortholog
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AAO10317
UniProt:
Q8DBA6
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All DBs
Position
I:complement(1908998..1910131)
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AA seq
377 aa
AA seq
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MTDSPVLALTKDLISRQSVTPEDAGCQDVMIARLEALGFTIERMVFEDTTNFWARRGTQA
PLFAFAGHTDVVPAGKLEHWHTPPFEPTEKEGYLYGRGAADMKGSLAAMIVATERFIAEH
PDHQGSIGFLITSDEEGPFINGTVRVVETLMARDENIDMCIVGEPSSTEVVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLADNPVHKSLLAIHALATTEWDKGNEYFPPTSFQIPNVQA
GTGASNVIPGEFHVQFNLRFSTELCNERIVERVTQTLDQHDLNYDLKWTYNGDPFLTDTG
ALLDAVVDAVDSVNQTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKIDD
LEKLTDMYQKTLENLLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagcccagtactggctctaaccaaagatctcatcagtcgccagtcggtaacc
cccgaagacgccggttgccaagatgtcatgatagcgcgcctagaggctcttggttttacc
attgagcgcatggtgtttgaagataccaccaacttttgggctcgccgtggcacacaagcg
ccactcttcgcctttgcaggccacactgacgtggtgcccgctggaaaattagagcattgg
cacacaccgccttttgaaccgaccgaaaaagaaggctatttgtatggccgtggggctgcg
gatatgaaaggctcattggcagcaatgatcgtcgcgacggagcgttttatcgcagaacat
cccgatcatcagggttctatcggtttcctgatcacctcagatgaggaaggcccgtttatc
aatggcacggttcgcgttgtggaaacgttgatggcgcgtgatgaaaacatcgacatgtgt
attgtcggcgagccatcaagcaccgaagtcgttggtgatgtagtaaaaaatggtcgtcgt
ggttcgatcactggcgacttgaccgtcaaagggactcaaggccatgtggcttaccctcat
cttgcggacaacccagtgcacaaatcgcttttggcaattcacgccctagcgaccactgag
tgggacaagggtaatgaatacttcccgccaaccagcttccagatcccgaacgtacaagcg
ggtacgggtgcgtccaatgttatcccaggtgagttccacgttcagttcaatttgcgcttt
agtaccgagctttgcaacgagcgaattgtggaacgagtgactcaaacactcgaccaacat
gacctcaattacgatctcaaatggacatacaacggcgacccattcctaactgatacggga
gcacttctggacgcggtggtggatgctgtcgatagcgtcaaccaaaccaaacccgcgtta
ctgaccactggcggtacttcagacggacgctttatcgcacgaatgggtggacaagtagtt
gagctaggaccggtgaacgccaccatccataaagtgaacgagtgcgtgaagatcgatgac
ttagaaaagctcaccgatatgtaccagaaaacattggaaaacttattggcatga
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