Vibrio vulnificus CMCP6: VV1_2003
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Entry
VV1_2003 CDS
T00108
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03030
DNA replication
vvu03430
Mismatch repair
vvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV1_2003 (dnaX)
03430 Mismatch repair
VV1_2003 (dnaX)
03440 Homologous recombination
VV1_2003 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvu03032
]
VV1_2003 (dnaX)
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_2003 (dnaX)
Enzymes [BR:
vvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV1_2003 (dnaX)
DNA replication proteins [BR:
vvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV1_2003 (dnaX)
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV1_2003 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_2
AAA_14
ResIII
EAL
AAA_18
SKI
AAA_assoc_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
AAO10400
UniProt:
A0A3Q0L4K5
LinkDB
All DBs
Position
I:1998757..2000961
Genome browser
AA seq
734 aa
AA seq
DB search
MSYLALARKWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAK
ALNCETGITSAPCGQCDTCREIEEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITV
DAIHQQLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHM
LGTIDTDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPS
SLDKAQPDAEKIELLSRALSPQDVQLFYQIALKGRDDLSLAPNGRIGMEMIVLRMMAFRP
ADVSQANIISAQGADLASAPAAQSAAPQVSTSPAQTAPAMSAKPSAERVAPAERPQAVSH
APSRPTSSMNAPSSVAPQPVQTEMPPQYDAPPMDYADYPPMDDMPPMGYGYEDAAALQPE
PQPAPQPAPQHTPESASPASGGLTGLRHQLRSQRQGLAQNGGSKKSKAASAEKESVLDRV
AQKQATAAQVSPRQSLAPSEPEVKEDEPYQWRPSQPVVQSKSKELTPTEIKRALEHEKTP
EMAEKLVAESLEQSEWAKLITQLETAKLVEQLALNSAFNKDGSTIALTLRSHQQHLNTDK
AQKELLSALNETLGETCHLSVEVGEQGETPLELRERLYQQKLQQAFTSLENDTHVQFILR
RFSAELDRDSVRPV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtccgcgtcaatttaaagaagtggtgggg
caaggccatgtgctgactgccctagaaaatgctcttgagcacaatcgtctgcaccatgct
tacttgttcagtggcacacgaggtgtgggtaaaacctcgattggtcgcttgtttgccaaa
gctctcaactgcgaaacgggcatcacctcagcgccttgtggacaatgtgatacctgccga
gagattgaagaagggcgcttcgttgatctattggagattgacgccgcatcgcgtactaaa
gttgaagacactcgtgaactgttagacaacgttcaatacaaaccagcgcgcggtcgtttc
aaggtttacttgatcgacgaagtgcacatgctctcgcgtcactcttttaatgcgttactc
aaaaccttagaagagccgccagagtatgtgaaattcctattggcaacgacggatccacag
aaacttcctgtgacgattttgtctcgttgtttgcagttccaccttaagccgatcacggtt
gatgctatccatcaacagctcgattttattttggcaaaagaaggtgtcactgctcaagcg
cgtgcgcttggcatgatcgcgcatgctgccgatggcagtatgcgtgatgccctaagctta
accgatcaagcaattgcgttaggcaatggtcagattgaaaccgatctggtcagccatatg
ttaggtaccattgacaccgatcaagcgatccatctcttagaagccatcagcagcaagcag
ccacaagtggcgatggataagattcagcagctcgcgcaaaatggtgcggagtgggatggt
ttgttgcaacaattggcgactcaactgcatcgcattgccatgtaccagctgttgccttca
agcctagacaaagcgcagcctgatgcagaaaaaattgagctgcttagccgagcactgtca
ccacaagatgttcagctgttttatcagatcgccttaaaagggcgtgatgacctctctttg
gccccaaatgggcgtatcgggatggaaatgattgtgttgcgtatgatggcatttcgtcct
gcggatgtgtcgcaagcgaacatcatttctgcgcaaggtgcggatctagcatcagctccg
gcagctcaaagtgccgctcctcaagtgagtacgtcgccagcccaaacggccccggcgatg
agcgcaaagccaagcgctgaacgggttgctcctgcagaacgtcctcaagcggtcagtcac
gcgccatcgcgtcccacttcatcgatgaacgccccaagttctgtggcccctcagcctgtt
cagacagagatgccacctcaatatgatgcgccaccgatggattatgccgattatccacct
atggatgacatgccgccaatgggttatggctatgaggatgcagccgcattgcagcctgag
cctcaacctgcgcctcaacctgcgccgcagcacacgcctgaaagcgcaagtccagcttct
ggtggcttaaccggtttgcgtcatcaattgcgttctcaacgtcaagggttggcacaaaat
ggtggctcaaaaaagtctaaagcggcatctgctgagaaagagtcggtcctcgatcgagtc
gcgcaaaagcaggcaactgcagcgcaggtgtcgccacgtcaaagccttgcgccgtcagag
cctgaagtaaaagaggatgaaccctatcaatggcgtccgagtcagcctgtggtgcagtct
aagagcaaagagctgacgccgacggaaattaaacgtgcacttgagcacgaaaaaacgcca
gaaatggcggaaaaactcgttgcagaatcgctcgagcagagtgagtgggcaaaactgatc
actcagctcgaaacggcaaaattggtggaacagttagcgctcaactcggcgtttaacaaa
gatggttcaaccatcgctttgacgctacgtagccatcaacaacatttaaataccgataaa
gcgcaaaaagagctgctctcagcgctcaacgaaacgctgggtgaaacttgccatctctct
gtggaagtcggagagcaaggtgagactcctctagagttacgcgaaaggctttatcagcaa
aaattacagcaggctttcactagcctggaaaatgacacccatgttcagtttatactgcgc
cgattcagtgcagaactggacagagacagtgttcgccctgtctga
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