Vibrio vulnificus CMCP6: VV1_3001
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Entry
VV1_3001 CDS
T00108
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03030
DNA replication
vvu03430
Mismatch repair
vvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV1_3001
03430 Mismatch repair
VV1_3001
03440 Homologous recombination
VV1_3001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvu03032
]
VV1_3001
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_3001
Enzymes [BR:
vvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV1_3001
DNA replication proteins [BR:
vvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV1_3001
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV1_3001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
AAO11328
UniProt:
A0A3Q0L6Z1
LinkDB
All DBs
Position
I:complement(3068904..3069860)
Genome browser
AA seq
318 aa
AA seq
DB search
MTHYPWLASTWQGLQSAMSAQRLPGAILLQSDVELGVDELIEKFSAALLCKTYPDEGCGF
CHSCELLKSQNHPDLHFIRPEKEGKAITVEQIRQCNRQAQESSQMGGYRLFVIEPAEAMN
ESASNALLKTLEEPSGSCLFLLICHDKKRLLPTIISRCQQWSITPPEVSVSMQWLQQQGV
SVNESFLKLAHYSPVTAMHMAKESEFQHYEKLERQFVDFLIQADSDYVSLCQTVQAATLR
NLSWLWLLLSDAQKVHFGLQNEETLQGSHALGQLPLSGLQTSMVKLNQLNQQLHQFSGLN
EELMIINWLIETREALCL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgacacactatccttggttagcatcgacatggcaagggctgcagtccgccatgtcggca
cagcggttacctggtgccatcttgttgcaatctgacgttgagctcggtgttgacgagctt
atcgaaaagttttcggcggctttactgtgtaagacttaccctgatgagggttgtggcttt
tgccatagttgcgagctgttaaagtcgcaaaaccatcctgatcttcatttcattaggcca
gagaaagaaggcaaggctattactgttgagcagatacgccaatgtaaccgtcaggcacaa
gaatcttctcaaatgggcggatatcgtttgtttgttatcgaacctgcggaggcgatgaac
gaatcggcttcaaatgcgttgttgaaaacattggaagagccgtctgggagctgcctattt
ttgttgatttgccacgataagaaacggttgttgcccactatcatcagccgttgtcaacag
tggagcataacgcctcctgaggtctcggtgtctatgcaatggttgcaacaacaaggggtt
agcgtgaatgagtcctttctgaaactggctcattactcgcccgtgacggcaatgcacatg
gcaaaagaatcagagtttcaacactatgaaaaactcgaaagacagtttgtggatttctta
attcaggcggattctgactacgtgtcactgtgtcagacagttcaagccgcgacgttacgt
aatctctcgtggttgtggttactgctttctgatgcgcagaaggttcattttggcttgcaa
aatgaagaaacattgcaaggtagtcacgcgctagggcaactgcctttgagcggattacag
acctcaatggtaaaactcaatcaattaaatcaacagttacatcagttttcgggtttaaac
gaagaactgatgatcatcaactggttaatcgaaactagagaggcattatgtttgtag
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