Vibrio vulnificus CMCP6: VV2_0079
Help
Entry
VV2_0079 CDS
T00108
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV2_0079
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VV2_0079
Archaeal homologous recombinant proteins
VV2_0079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AAO07055
UniProt:
A0A3Q0KX77
LinkDB
All DBs
Position
II:80544..81677
Genome browser
AA seq
377 aa
AA seq
DB search
MKFIHTSDWHLGRQFHNVSLLDDQRVVLDQLVNYIRNHPVDAVVVAGDIFDRSVPPTAAI
ELLGKTIDEICGELDTPMILIPGNHDGAARLGFGASQMKPSGLHIISQFSQMIEPVVLKS
ERAGEVAFYGMPYSDPEQVRDAFGVLVSNYDEAHRVLVDEIRQHFDPKQRQVLLSHCFVD
GAQSSESERPLSIGGSDRVSYEHFSIFDYVALGHLHQPQKRVEEHIRYSGSLMKYSFSEQ
FQKKGFMLVELDENGFVCAEHIALDAPHDMRVIEGEMNDILEQGKQDPNYQDYLLVRLHD
KHAILNPMEKLRAVYPNVLHLEKPGMLMNVEQGLSQAKLARSEVDMFRDFFAQAQDNPLS
ETQDAAICQLIQQLTKS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatccatacctcagattggcatctcggacgccagtttcacaacgtttcactc
cttgatgatcaacgcgtcgtgctcgaccagttagtcaattatattcgaaatcatcccgtt
gatgccgttgttgttgctggcgatatttttgatcgctcggtgcctcctactgcggccatc
gaattgctcggcaaaacgattgatgaaatttgtggtgagcttgatacaccgatgatcctg
attccaggcaaccatgatggtgctgcgcgtttgggctttggtgcctcgcaaatgaaaccc
tcagggctgcatatcattagccagttctcacaaatgatcgaaccggttgtgcttaaaagt
gagagggcgggcgaggtggcattttatggcatgccttacagcgatcctgaacaagtacgc
gacgcatttggcgtgctggtgagcaattatgatgaggcgcatcgcgtcttggttgatgaa
attcgccagcattttgatcccaaacagcgtcaagtgctattgagccactgttttgtcgat
ggggcgcagagcagtgagtcggagcgtccactttccatcggtggatctgaccgcgttagc
tatgagcatttttccatttttgattacgtcgccttagggcacctgcaccaaccacaaaag
cgagtggaagaacacattcgttatagtggttcattgatgaaatacagtttttctgagcag
ttccagaaaaaaggattcatgttagtggagttggatgaaaacggttttgtctgcgcagag
catattgcgctcgatgcccctcatgacatgcgggtgattgagggcgaaatgaacgatatt
ctcgaacaaggtaagcaagatcccaattatcaggactatttgcttgttcgcttgcacgac
aaacatgccattttaaacccgatggaaaagttacgagcggtctatcccaatgttcttcat
ttagaaaaaccagggatgttaatgaacgtagagcaagggttatcgcaagctaaattggct
cgtagcgaagttgacatgtttcgtgatttctttgcacaagcgcaggacaacccactgagc
gaaacgcaagatgccgcgatttgccagctcattcaacaattgaccaagtcttag
DBGET
integrated database retrieval system
