Vibrio vulnificus CMCP6: VV2_0080
Help
Entry
VV2_0080 CDS
T00108
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV2_0080
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VV2_0080
Archaeal homologous recombinant proteins
VV2_0080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
DUF3867
AAA_16
AAA_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAO07056
UniProt:
A0A3Q0KX62
LinkDB
All DBs
Position
II:81686..84751
Genome browser
AA seq
1021 aa
AA seq
DB search
MKPLKLTMQAFGPFAEREVIDFTQLGENPLFLINGPTGSGKTSILDAISFALYGETTGNE
RQGMQMRSDLASIHLATEVTLEFLLHGKRYKVIRLPEQEAAKARGEGTTTKKHTAALYLC
QDDEELITSKTAEVKTRVTELIGLNETQFRQVMVLPQGKFRDLLLASSKDREEIFGQLFQ
TEIYKRIEWALKDKANAISKAKEEFDNQIRGALEVADVSDEQALKEALADKKTQLMQWQE
TEKHALERYNSAKQSLSTAKALVEDFNKLALAKTNLDAHLAKNDQMFHLAQKLEQARQAQ
QLDAPYRQWKNALNDVHAQQGKIDELNASLNILLLQSNELEQQCLQAQKNAEQIPQLQQR
TYELETVKSKLVEKAQFEQEIIRLEEEVQKFAHQLKRVQEHKVVMQQELTSAIEAFEKAK
QQAAEIPRLEARESELKRQISDYEQYQNLNTALQNLLTQTEQKEQLHQQAKQHWLNAQQS
ADSIELSWHNGQAAILAQRLHQGEACPVCGSLEHPQKAQFVGEPVHKQQVEQAREQEKTA
LAQLNQHHQELELHLAQVKQQQKAIEEKATQLGELLNSPLETLQAQALEIHHTLKQLQGL
DLAQQESHVKQLTERCAKGEEMEKELAQQHISSRATLKEKTQQLAKFSQQIAAQFSHVAQ
VELEIAQLKQQTTALQTAKETSQKRFDEIQQTLAARQSEVKAHGEMLLQTQQRSEQNQTA
WLEALSASSFDDEPHYLALRVEPEQIEQWKREIEQHQQQATRLEQSYHDLKERLKDQQAP
ELEQLELLVTTTEQQYQQNKNELDAVRSLVAKLETVQAKIAELHTHNHRLEEEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQASHRLALMSKGRYQLTRKTEGFKGTAGRGLD
LIVEDSYTGKSRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLETLFIDEGFGSLDP
ESLDLAIQTLVELQQTGRMIGVISHVSELKEQMQQRIDVIPSRVGSSIRLKSAFAANAST
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactcaaacttaccatgcaggcgtttggtccatttgctgaacgtgaagttatt
gattttacccaactgggtgaaaacccactgtttctaattaatgggcccacaggttcggga
aaaacctctatcttggatgcgatcagtttcgccctttatggcgaaaccacaggcaatgag
cgccaaggtatgcagatgcgttcagatttggcctctatccatctagccacggaagtgacg
ttagagtttctgctacacggaaaacgctataaggtgattcgcctgcctgagcaagaggcg
gcaaaagcgcgcggtgaaggcaccaccaccaaaaaacacactgccgcgctttatctttgc
caagatgacgaagagctgatcaccagcaaaacggctgaagtgaaaacgcgagtgacggaa
ttgattggcttgaacgaaacgcagtttcgccaagtcatggtgttgccacagggaaaattc
cgcgatttgctgctggcgagttccaaagatcgtgaagagatttttggccaactgttccaa
accgaaatttacaaacgcattgaatgggcgctaaaagacaaagccaatgcgattagtaaa
gccaaagaagagtttgataaccaaattcgtggggcgctagaggtggcggatgtcagtgat
gagcaggcgctcaaagaggcgcttgcagacaaaaaaacgcaactgatgcagtggcaagag
acagagaaacacgctctcgagcgttacaattcggccaagcaatccctttccacggctaag
gctctggtggaggattttaataaactggctttggccaaaacgaatttagatgcccatttg
gcgaaaaatgatcagatgtttcacttggcgcaaaagctggaacaagcacgacaagctcag
cagcttgacgcaccgtatcgccagtggaaaaacgcactcaatgatgttcatgctcagcaa
ggcaaaattgacgagcttaacgcatcattaaacatactgttgttgcagagcaatgagctg
gaacaacagtgtttgcaggcgcagaaaaatgccgaacaaattcctcagctacaacagcga
acgtatgaattagagacggttaaaagcaagctggtggaaaaagcccagtttgaacaagag
atcattcgtcttgaagaagaagtacagaaatttgctcatcaattaaaacgcgtgcaagaa
cataaagtcgtgatgcagcaggaactgacgtccgccattgaagcgtttgaaaaggcaaag
cagcaagcggcagagataccgagacttgaagcgcgagagagtgagcttaagcgtcagatc
agtgactatgaacaataccagaatctgaatacagcgctgcagaatttactcacacaaact
gaacaaaaagagcagttacatcagcaagccaagcagcattggctcaacgcccaacagtct
gcggatagcatagaactgagttggcataatggccaagccgctattttggctcagcgcctt
catcaaggggaagcttgcccagtttgtggtagcctcgaacacccgcaaaaagcgcagttt
gtcggtgagcctgtgcataaacagcaagtagaacaggcccgtgagcaagaaaaaaccgct
ctcgcacagctcaatcaacatcaccaagagctggagctgcaccttgcacaagttaagcaa
cagcagaaagcgattgaggaaaaagcaacacaactcggtgagctgcttaacagcccgtta
gaaaccttgcaggcgcaagctcttgaaatccatcacacactcaaacagctgcaagggttg
gatctcgctcagcaagaaagtcatgttaaacaactgaccgagcgttgtgcgaagggcgag
gagatggaaaaagaactcgctcagcaacatatttctagcagagcaacgttgaaagaaaaa
acgcaacagttggcgaagttcagccaacaaattgccgcacaatttagccatgtagcccaa
gttgagctggaaattgcgcagctcaagcaacaaacgacggctttacaaacggcaaaagag
acgagccaaaagcgttttgatgagattcaacaaacgcttgccgcgcgtcaaagtgaagtt
aaggcacacggtgagatgttgctgcagactcagcagcgcagtgaacaaaaccaaactgca
tggttggaggcgttgtctgcatcgtcatttgacgatgaaccgcactatttggcgttgcgt
gtcgagccagaacagatcgaacaatggaaacgtgagattgagcaacatcaacagcaggcg
acacgtttagagcagagttatcacgaccttaaagagcgtttgaaagatcagcaagcaccc
gagcttgagcaattagagctgttggtgacaacgacagaacagcagtatcaacagaacaaa
aatgagttggatgcggtgcgttcactggtggcgaagcttgagaccgtgcaagcgaagatt
gctgaactgcacacgcataatcatcgccttgaagaagagtacaaggtttttggcacactc
tacgatgtggcaagcggcaaaacaggcagtcgcattagcttgcaccgttttgtgttaggg
gtgttgctggatgatgtactgattcaagcttcgcatcgtttggcattaatgagcaaaggt
cgctaccagttaacgcgaaaaaccgaagggtttaagggcacggcgggtcgcgggctcgat
ctgattgtggaagacagctacaccggaaaatcgcgtgatgtcgccacactctcaggtggt
gaatcgttcatggccgcactttccctagcactgggtttatcggatgttgttcagtcatac
agtggtggcattcgtttagagactttgtttattgatgaaggctttggtagcttggatcct
gaatcccttgatcttgcgattcaaaccttggtggagttgcagcaaacaggccggatgatc
ggggtgatttcccatgtgtcagagttgaaagaacaaatgcaacaacggattgacgtgata
ccgtcgcgagtgggctcttcgattcgccttaagtccgcttttgccgctaatgcctcaaca
agttga
DBGET
integrated database retrieval system