Vibrio vulnificus CMCP6: VV2_0141
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Entry
VV2_0141 CDS
T00108
Name
(GenBank) GGDEF family protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VV2_0141
Enzymes [BR:
vvu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VV2_0141
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AAO07114
UniProt:
A0A3Q0KXB9
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All DBs
Position
II:complement(150876..152768)
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AA seq
630 aa
AA seq
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MADIDTSQLIVPDSVLKSWQEIVDLVAKMTQCPAALIMRIHENDIEVFSSSRSENNPYAQ
NAKDSLGHGLYCETVISERRMLNVPNALNDPEWDHNPDIKLGMICYCGLPVFWPDDTPFG
TICMLDSQERYFDEDAMSLLGRFQTAIEGQLETLYRKEELAQLNQELEQKVAERTKTLAD
LSSRLLTEIEQRTAAESHLDFHLHYDPLTKLPNRITLADDLAEQMASLEDNEQITLIYFS
LKNFKFVNASYGYMFGDQILSSLSQRICHKLPKKWKLARIVGSDFVLAAQHLRKPEIQEQ
VIERITKACTQPFNVNDMSVNLQCHLGVALAPMDATDSFSLIQRACSAMSEGKNEGLQVS
YFNFAAQKAAEERLQLESHLSEALKNNELEVHFQPIICLKQGGKIIGAEALLRWNNPTLG
QVSPDRFIPLAESNGQIIEIGYFVLHQALKQAAAWHRASPHAFKVAINISPIQFRERHFV
QHLQDIIDLYQLPAKCIELELTEGILLQDEEYAQNVLAQLRQFGVSISLDDFGTGYSSLS
YLQKYAFDTLKIDRSFINQLEHNQHNRELTRAIIAMAHKLNMMVIAEGVEDRYQEDFIRT
EECNYAQGFLYGKAVPADDFSQQLASSQQF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatagatacctctcaattaatcgttccggattctgtactcaagagctggcaa
gaaatcgtcgatttagttgccaaaatgacgcaatgtcctgcagctctgatcatgcgtatt
cacgaaaacgacatcgaggtgttttccagcagtcgtagcgaaaataacccctacgcgcaa
aatgcaaaagattcgcttgggcatggcctgtattgtgaaaccgtgatcagcgagcggcgc
atgttgaatgttcccaatgcgcttaacgatcctgaatgggatcataatccagacatcaaa
ctgggcatgatatgttactgcggactgcctgtgttttggccagatgacacccctttcggc
accatctgtatgcttgatagccaagagcgttactttgatgaggacgcgatgtcattactt
ggccgctttcaaacggccattgaaggacaattagaaaccctttaccgtaaagaagagctt
gcccaactcaaccaagagctggaacaaaaggtcgcagaaagaaccaaaacactcgccgat
ctgagtagccggttgctgacagaaatcgagcaacgaaccgctgctgaaagccatttggac
tttcaccttcattacgacccgctcacaaaactccccaaccgaattaccttggcggacgat
ctcgccgaacagatggcttctttagaagataatgagcaaattaccctgatctatttcagt
ttgaaaaactttaagtttgttaacgcaagctatggctacatgttcggtgatcaaatttta
tcctctctgagccaacgcatttgtcacaaactgcctaaaaagtggaagctggcaagaatt
gtcggatcggatttcgtcttagcagcgcagcatctgcgcaaacccgagatacaagaacaa
gtcatcgaacgcattaccaaagcgtgcacccaaccgtttaacgtcaacgatatgagtgtc
aatttgcaatgtcatttaggggtcgcattagccccgatggatgcaacagactcatttagc
cttattcagcgagcgtgctctgcaatgagcgaaggtaaaaacgaaggtttgcaggtctct
tattttaattttgccgcacaaaaagccgcagaagagcgcttgcaactggagtcacatctc
tctgaagcactgaagaacaacgaacttgaagtgcattttcagccgatcatttgcttgaaa
cagggagggaaaatcatcggtgccgaagcactactgagatggaataatccaacgcttggg
caagtctccccagatcgatttattcctttagcggaaagtaacggccaaattattgaaatc
ggctacttcgttttacatcaagcattgaaacaagcagcggcatggcatcgcgcatcacct
cacgcgtttaaagtggcgattaacatctcccccatccagttccgtgaacgacactttgtg
caacacttacaagacattattgatctttaccaattgccagcaaaatgcattgaactggaa
ctgactgaaggtattctgctgcaagatgaagagtatgcgcaaaacgtcctcgctcagttg
cgtcagttcggtgtcagcatctcgcttgacgactttggtaccggttactcttcactcagt
tatctgcaaaaatacgctttcgatacgctaaaaattgatcgcagttttatcaatcagttg
gaacacaatcagcacaatcgagaactgacaagagccatcatcgccatggcgcacaaactc
aatatgatggtgatagcggaaggggtagaagatcgataccaagaagacttcattcgaacc
gaggaatgcaactacgctcaaggctttttgtatggcaaggcggttccggctgacgacttc
tctcaacaattagcaagtagtcagcaattttaa
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