Vibrio vulnificus CMCP6: VV2_1208
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Entry
VV2_1208 CDS
T00108
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VV2_1208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvu03000
]
VV2_1208
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV2_1208
Enzymes [BR:
vvu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VV2_1208
Transcription factors [BR:
vvu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VV2_1208
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VV2_1208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HTH_23
MerR_1
Motif
Other DBs
NCBI-ProteinID:
AAO08105
UniProt:
A0A3Q0KZW5
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All DBs
Position
II:1305465..1306850
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AA seq
461 aa
AA seq
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MAILNYSSLTTEQCQQARMARDSRFDGLFYVAVKSTGIFCRPVCPANLPKEENVEYYHDK
AQALSAGYRPCLRCRPDSAPDSWAWKGVETTFQRALTLIEQGALQTERLSALAQRLGVSD
RYIRQLFRRYLGISPKQYAQSQQLLFAKQLLHGSSLSVTEIGFASGFNSTRRFNDAFQKS
MGMPPSKIRRSKGGASHDQSHIVLAFRGDLNVKHMLDFYRQRAIEGVEVVTETSYQRQVV
INGKTVGFRAEFPATFPAEKRQLVVYFSMDDLTLLRPMVAGIRRMFDLDCDTRVIEAHLN
TVAPGLVKSVGIRIPGVWSVWEAGVRAILGQQVSVKAAIGQLNLLVATLHPDSEVRTFPS
PQQVVDADLHFLRMPQSRKETLRRFAAMMLENEHADPNQWLALKGIGPWTVSYAQLRGLS
QPDRLLEKDLVVKKALAQFPTLNQESASPWGSYATFHLWNQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccattttaaactactcatcgctcacgacagagcaatgtcaacaagcaaggatggcc
cgagatagtcgctttgatgggctgttttatgtggcggtcaaaagcactgggattttctgc
cggcctgtatgtcctgccaatttacccaaagaagagaacgtggagtattaccacgataaa
gcgcaagccttgtcggctggctatcgcccatgtttgcgttgtcgccccgacagcgcgcct
gattcttgggcgtggaaaggggtcgaaaccacatttcaacgtgcgttgaccttgattgaa
caaggggcgctacaaacggagaggttgtcagctttggcgcaacgtttaggagtgagcgat
cgctatattcgtcaattatttcgccggtatttggggatctctccgaagcaatatgctcag
tctcagcagttgttgtttgccaaacagttgctgcatggtagctcattgagcgttaccgaa
attggctttgcttccggctttaacagtactcgccgttttaatgatgcgtttcaaaagtcg
atgggtatgcccccttcgaaaatccgtcgaagtaaagggggggcgagtcacgatcagtcg
catattgtgctcgcgtttcgcggtgatttgaacgtaaaacacatgctggatttttatcgg
cagcgagcgattgaaggcgtagaggtggtgacggagacgagttatcaacgtcaagtcgtg
atcaacggaaaaacggttgggtttcgcgcggaatttcccgcaacatttccagcagagaag
cggcagttagtggtttatttttcgatggatgatctgacgttgttgcgcccgatggtggct
ggaatcaggcggatgttcgatctcgattgcgacacgcgcgtgattgaagcccatctcaac
actgtagcgcctgggttggtcaaaagcgttggtatccggattccgggtgtctggagtgtt
tgggaagcgggcgtacgagcgattttgggccaacaagtctcggtcaaagccgccatcgga
caactgaatctattggtcgcgactttacaccccgattctgaagtgcgcacttttccttca
ccacaacaggtggttgatgcggatctgcatttcttacgaatgccacaaagtcgaaaagaa
accttaagacgttttgctgccatgatgctggagaatgaacacgccgatcccaatcaatgg
ttggcgttaaaaggcattgggccgtggacggtcagttacgcccaattgcgaggcctttcg
cagccagacagactgctagagaaggatttagtggtgaaaaaagcactggctcagttcccc
actttgaatcaagaaagcgcttcaccttgggggagttacgcaacttttcatctatggaat
caataa
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