KEGG   Vibrio vulnificus CMCP6: VV2_1208
Entry
VV2_1208          CDS       T00108                                 
Name
(GenBank) 3-methyladenine DNA glycosylase
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
vvu  Vibrio vulnificus CMCP6
Pathway
vvu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VV2_1208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vvu03000]
    VV2_1208
   03400 DNA repair and recombination proteins [BR:vvu03400]
    VV2_1208
Enzymes [BR:vvu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     VV2_1208
Transcription factors [BR:vvu03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    VV2_1208
DNA repair and recombination proteins [BR:vvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VV2_1208
SSDB
Motif
Pfam: Ada_Zn_binding AlkA_N HTH_18 HTH_AraC HhH-GPD HTH_23 MerR_1
Other DBs
NCBI-ProteinID: AAO08105
UniProt: A0A3Q0KZW5
LinkDB
Position
II:1305465..1306850
AA seq 461 aa
MAILNYSSLTTEQCQQARMARDSRFDGLFYVAVKSTGIFCRPVCPANLPKEENVEYYHDK
AQALSAGYRPCLRCRPDSAPDSWAWKGVETTFQRALTLIEQGALQTERLSALAQRLGVSD
RYIRQLFRRYLGISPKQYAQSQQLLFAKQLLHGSSLSVTEIGFASGFNSTRRFNDAFQKS
MGMPPSKIRRSKGGASHDQSHIVLAFRGDLNVKHMLDFYRQRAIEGVEVVTETSYQRQVV
INGKTVGFRAEFPATFPAEKRQLVVYFSMDDLTLLRPMVAGIRRMFDLDCDTRVIEAHLN
TVAPGLVKSVGIRIPGVWSVWEAGVRAILGQQVSVKAAIGQLNLLVATLHPDSEVRTFPS
PQQVVDADLHFLRMPQSRKETLRRFAAMMLENEHADPNQWLALKGIGPWTVSYAQLRGLS
QPDRLLEKDLVVKKALAQFPTLNQESASPWGSYATFHLWNQ
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggccattttaaactactcatcgctcacgacagagcaatgtcaacaagcaaggatggcc
cgagatagtcgctttgatgggctgttttatgtggcggtcaaaagcactgggattttctgc
cggcctgtatgtcctgccaatttacccaaagaagagaacgtggagtattaccacgataaa
gcgcaagccttgtcggctggctatcgcccatgtttgcgttgtcgccccgacagcgcgcct
gattcttgggcgtggaaaggggtcgaaaccacatttcaacgtgcgttgaccttgattgaa
caaggggcgctacaaacggagaggttgtcagctttggcgcaacgtttaggagtgagcgat
cgctatattcgtcaattatttcgccggtatttggggatctctccgaagcaatatgctcag
tctcagcagttgttgtttgccaaacagttgctgcatggtagctcattgagcgttaccgaa
attggctttgcttccggctttaacagtactcgccgttttaatgatgcgtttcaaaagtcg
atgggtatgcccccttcgaaaatccgtcgaagtaaagggggggcgagtcacgatcagtcg
catattgtgctcgcgtttcgcggtgatttgaacgtaaaacacatgctggatttttatcgg
cagcgagcgattgaaggcgtagaggtggtgacggagacgagttatcaacgtcaagtcgtg
atcaacggaaaaacggttgggtttcgcgcggaatttcccgcaacatttccagcagagaag
cggcagttagtggtttatttttcgatggatgatctgacgttgttgcgcccgatggtggct
ggaatcaggcggatgttcgatctcgattgcgacacgcgcgtgattgaagcccatctcaac
actgtagcgcctgggttggtcaaaagcgttggtatccggattccgggtgtctggagtgtt
tgggaagcgggcgtacgagcgattttgggccaacaagtctcggtcaaagccgccatcgga
caactgaatctattggtcgcgactttacaccccgattctgaagtgcgcacttttccttca
ccacaacaggtggttgatgcggatctgcatttcttacgaatgccacaaagtcgaaaagaa
accttaagacgttttgctgccatgatgctggagaatgaacacgccgatcccaatcaatgg
ttggcgttaaaaggcattgggccgtggacggtcagttacgcccaattgcgaggcctttcg
cagccagacagactgctagagaaggatttagtggtgaaaaaagcactggctcagttcccc
actttgaatcaagaaagcgcttcaccttgggggagttacgcaacttttcatctatggaat
caataa

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