Vibrio vulnificus CMCP6: VV2_1254
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Entry
VV2_1254 CDS
T00108
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG, TIGR01125
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vvu
Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvu03009
]
VV2_1254
Enzymes [BR:
vvu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VV2_1254
Ribosome biogenesis [BR:
vvu03009
]
Prokaryotic type
ribosomal protein modification factors
VV2_1254
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AAO08148
UniProt:
Q8D4N8
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Position
II:1373728..1375137
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AA seq
469 aa
AA seq
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MTVQTFTPNQTTTLDTAKKTIEQQSQELTPSGGNKIGFVSLGCPKNLVDSERILTQLRTE
GYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIREVH
PGVLGITGPHAYENVLEHVHQFAPKPEHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRC
TFCIIPSMRGDLVSRPVGEILSEAERLKNAGVKELLVISQDTSAYGVDSKHSLGFANGSP
VRQNIKALSEELGKMGIWVRLHYVYPYPHVDDLIPLMAEGKILPYLDIPFQHASPNVLKA
MKRPGRAERTLDQIKKWREICPELVIRSTFIVGFPGETDEDFEMLLEWLKEAQLDRVGCF
KYSPVEGAAANDIDDQISEEVKQERFECFMLVQQEISAAKLQKRIGSTMKVIIDEVDEEG
AIGRTYADAPEIDGLVYLNGETSLKAGELVDVLIEHADEYDLWGSLVRA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcaaacgtttacgccaaaccaaaccacaacgttggatacggccaaaaaaacc
atcgagcaacagagccaagagttaacgccaagcggcggtaacaaaatcggtttcgtctca
ttaggttgtcccaaaaacctcgttgattctgaacgaatcctgacgcaacttcgcaccgaa
ggctatgaaatcgtcaacagctaccacgattcggacgtggtgatcgtcaacacttgtggc
tttattgatagcgcagttcaagagtcgctcgacactatcggtgaagcgcttaaagagaac
ggcaaagtgatcgtgaccggttgcttgggcgcgcgtgaagatgaaattcgcgaagtgcac
ccgggcgttttaggcattacgggcccacatgcgtatgaaaacgtgttagagcacgtacat
cagtttgcgccaaagccagagcacaacccgtttaccagcctagtgcctgatcacggcgtg
aagctgacgccaaaacactacgcttacctaaaaatatcggaaggctgtaaccaccgttgt
accttctgcatcatcccgtccatgcgtggtgacttggtcagccgcccggtgggagaaatc
ctcagtgaagcagaacgcctgaaaaacgcaggggtgaaagagctattggtgatcagccaa
gacaccagtgcctacggtgtggacagcaaacacagcctgggttttgctaacggttctcca
gtgcgtcaaaacatcaaagcgctgagtgaagagctgggcaaaatgggcatttgggtgcgc
ctgcactacgtttacccatatccacatgtggatgatttgatcccgctgatggcggaagga
aaaatcctgccttacttggatattccattccaacacgccagcccgaatgtacttaaagcg
atgaagcgccctggccgtgcggaacgcacgctcgatcaaatcaaaaaatggcgcgagatc
tgcccagagttggtgattcgctcaacctttatcgttggtttccctggcgaaacggatgaa
gatttcgagatgctgctagagtggctaaaagaagcgcaactggatcgtgtgggctgtttc
aaatactcaccagtagaaggggcggctgcaaacgacattgatgatcagatctcggaagaa
gtgaagcaagagcgttttgagtgtttcatgctggttcaacaagaaatcagcgcggcgaag
ctgcaaaaacgcattggcagcaccatgaaagtgatcatcgatgaagtagacgaagaaggc
gcgattggtcgtacctacgcggatgcaccagaaatcgatggcttagtttacctcaacggt
gaaaccagcctcaaagcaggtgagttggtggacgtgcttatcgagcacgctgacgaatac
gacctgtggggatcgttggttcgcgcctag
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