KEGG   Vibrio vulnificus YJ016: VV0040
Entry
VV0040            CDS       T00150                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vvy  Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvy03400]
    VV0040
Enzymes [BR:vvy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VV0040
DNA repair and recombination proteins [BR:vvy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VV0040
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 DUF4335 PilB3_N SDE2_2C Phage_Mu_Gp27
Other DBs
NCBI-ProteinID: BAC92804
UniProt: Q7MQG8
LinkDB
Position
I:46389..48407
AA seq 672 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVGQTLGKGESKGLMVSTFHTLGLNIIKREYRHLGLKSGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRQLMSTISNWKNDMLSPEQAVARAQGEQQQLFAFCFEMYQKQMKAYNA
LDFDDLILLPVLLLRGHDEVRHYWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLANNDEHEAERVTGEIIAHKFLNRTDYRDYAILYRGNHQSRLIEK
SLMQNRVPYRLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPVTLEK
LGSYANMRGKSLFEASFELGLEQHLTGRGLDNLRRFTHWLVAIADQAERGDTVEAVRSLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNNDQEEKTLKEVVQRLTLRD
MMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGTEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFVMCKERRQYGELIKPSQSRFLDELPFDDVEWEQTKKPVTQEERMAKGQA
HIANLRAMFNKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaaactgaatccaagacaagacgaagccgtgaaatacgtatcaggtccctgcctcgtg
cttgcgggtgcgggttcaggcaaaacacgtgtgatcaccaataagattgcctatttggtg
caacagtgtggctacaaagcgcgtaatattgcggcggtcaccttcaccaataaagccgcg
cgtgagatgaaagaacgtgtggggcaaacactggggaagggggagtcaaaaggcctgatg
gtgtcaaccttccacacacttggtttgaatatcattaagcgagagtatcgccatctgggt
ttgaagtcgggcttttccttgtttgacgatcaagatcagcttgcactgcttaaagagctg
actgaaaaacagctggatggcgataaagatttgctgcgtcagttaatgagcaccatctca
aattggaaaaacgacatgctctcaccagagcaggccgtggcacgtgcgcaaggcgaacag
cagcagttgtttgccttctgttttgagatgtatcagaagcagatgaaagcgtacaacgcc
ctcgactttgatgatcttatcttgctgccagtgttactacttcgtgggcatgatgaggtg
cgtcactactggcaaaatcgtatccgttaccttctggtcgatgagtatcaagataccaac
accagtcaatatgaactggtgaaactgctggtgggggagcgcggacgcttaaccgtggtt
ggggatgatgatcaatcgatttactcttggcgtggcgcgaaaccgcaaaacttagtgttg
ctggggcaagattatcccaacttacgcctgattaaattggagcaaaactaccgctcgacc
agccgtattttgcgcgcggcgaatatcttgattgccaataacccacacgtgtatgaaaag
tcgctcttctcggaaattcccgatggtgaaaaactcaaagtgctgctggccaataacgac
gagcatgaggcggagcgcgtcacgggggaaatcattgcccacaagtttctcaatcgcacc
gactatcgtgactacgccatcctctatcgtggtaaccatcaatcgcgtctcatcgaaaag
tcgctgatgcaaaaccgcgttccttatcgactgtctggtggtacgtctttctttgcgcgc
gcggagatcaaagacatcatggcgtatttgcgagtgttggtgaatcctgatgatgacaac
gcatttttgcgcatcgtcaacacacccaagcgtgaaattggccctgtgacgctggagaag
ttaggcagctatgccaacatgcgtggcaaaagtttatttgaagccagctttgaacttggc
cttgagcagcacctgaccggacgtggtctcgataatttgcggcgctttactcattggctg
gtggcgattgccgatcaagcggagcgaggggataccgtggaagcggtgcgctcgttggtg
cgagacattcattatgaggattggttgtacgaaacatctgccagcccgaaagccgcagaa
atgcgcatgaaaaacgtctctgatctctactcttggattgtcgctgatttagaaggtgac
aataacgatcaagaagagaaaacgttgaaagaagtggttcaacgtttgacactgcgtgac
atgatggaacgtggtgaagaagatgaagatagtgatgccgtacaactgatgacactgcat
gcgtctaaaggtctggaatttccatatgtgtacctgatcgggactgaagaagggatattg
ccgcaccaaaccagtatcgatgaagataacgtcgaagaagaacgtcgcttaatgtacgtc
ggcattacgcgtgcgcagcgagaactgactttcgtgatgtgtaaagagcgtcgtcaatat
ggggagttgatcaaacccagccaaagtcgcttcctagacgagttgcctttcgatgatgtg
gaatgggaacaaaccaaaaagccagtgacacaggaagaaagaatggccaaaggccaagcg
cacattgccaacttacgtgccatgttcaacaagaagtag

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