Vibrio vulnificus YJ016: VV0098
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Entry
VV0098 CDS
T00150
Name
(GenBank) predicted signal transduction protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VV0098
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VV0098
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HDOD
EAL
Motif
Other DBs
NCBI-ProteinID:
BAC92862
UniProt:
Q7MQB0
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All DBs
Position
I:109818..111041
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AA seq
407 aa
AA seq
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MNTTYVARQPIFNRKKHTLGYELLFRDGESNAYPVHIESNRATYRLIVENFLSVGTNPAI
ASSRCFINFPYQTLIRRLPLSLPKNKVVIEVLETCQPTDELLDAIRDLYREGYVIALDDF
TLTPEWRRFLPYVHIVKLDVMDLGMEKACELVKEHLARRVKYHFLAEKVETAEEFELAKE
AGFKFFQGYFFSKPEVVQTRYVSPEQTVALELFREVCKSEPDFGRIEQIISQDVALSYKL
LRFVNTQSTRLEVTISSFRQALIYLGQDKLKMFVSLVVASYVSTNKPRELYNLSLQRAQF
CELMSRRHPFSKHNEQGFMIGLLSILDAMMDLSVESLVNHLPLSEIAKQALLCRGGAYGA
LIALEECFEQADWRGIEQWCEQLGLSIEEVRYELVEAQRWSQEFALI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaataccacatacgtcgcacggcagccgatctttaatcggaagaaacataccttaggt
tatgaacttttgtttcgtgacggagagagcaatgcctatccggtacacatcgaatcaaac
cgcgcgacctatcgcctgatagtggaaaactttctgtccgtaggcaccaatccggccatc
gcttcttcacgctgttttatcaactttccgtatcaaaccttgattcgccgtttgccactc
agtctgccgaaaaacaaagtcgtgattgaggtgctggaaacgtgtcagccaacggatgag
ctgcttgacgccattcgagatttgtatcgtgaaggctatgtgatcgcgctggatgacttc
actttgaccccggagtggcgacgttttttgccgtatgtgcacatcgtgaaattggatgtg
atggatttggggatggagaaggcgtgtgagttggtcaaagaacacttggcacggcgcgtg
aaataccatttcttggcagaaaaagtggaaacggcagaagagtttgaactggcgaaagag
gcaggatttaaattctttcaaggctacttttttagtaagccagaagtggtgcaaacgcgt
tatgtcagccctgagcagaccgtggcgttggagttgtttcgtgaagtgtgcaagagcgag
ccagattttggccgcattgagcagatcatttcgcaagatgtggcgttatcttacaagctg
ttgcgtttcgtcaatactcagtcgactcgtcttgaagtcaccatcagttcgtttcgccaa
gcactgatttaccttgggcaagacaaactgaaaatgttcgtctctctggtggtggcgtct
tatgtctcaaccaacaagccgcgtgagttgtataacctctcgctgcaacgcgcgcaattt
tgtgagttgatgtctcgtcgtcaccctttcagtaagcataacgaacaaggctttatgatc
ggtttgctgtcgattctcgatgcgatgatggatctgtcggtggaatctttggtcaaccac
ctgccattgagcgaaattgcgaaacaggcattactgtgtcgtggcggtgcttatggggca
ttgattgcactcgaggagtgtttcgaacaggcagactggcgtggcattgagcagtggtgt
gaacaactggggttgtcgatagaagaggtgcgttacgaattggtcgaagcgcagcgttgg
tcgcaggagtttgctctgatctaa
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