Vibrio vulnificus YJ016: VV0242
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Entry
VV0242 CDS
T00150
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VV0242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvy03021
]
VV0242
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV0242
Enzymes [BR:
vvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VV0242
Transcription machinery [BR:
vvy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VV0242
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VV0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
BAC93006
UniProt:
Q7MPX0
LinkDB
All DBs
Position
I:complement(252387..252659)
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLIAARRARQMQTGGKDSLVPEENDKPTVIALREIEEGLIT
KEVLDARERQEQQEQEAAELAAVSSIARNR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgttgaaaaagttggcaaccgtttcgacttggtt
ctgattgcggctcgccgcgctcgtcaaatgcaaactggcggcaaagattcactagtgccg
gaagagaatgataagccaaccgttatcgctctacgcgaaatcgaagaaggccttatcact
aaagaagtgcttgatgcacgtgagcgtcaagagcaacaagaacaagaagcagcagaacta
gcggccgttagcagcatcgctcgcaaccgttaa
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integrated database retrieval system
