Vibrio vulnificus YJ016: VV0612
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Entry
VV0612 CDS
T00150
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00470
D-Amino acid metabolism
vvy00550
Peptidoglycan biosynthesis
vvy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VV0612
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VV0612
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vvy01011
]
VV0612
Enzymes [BR:
vvy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VV0612
Peptidoglycan biosynthesis and degradation proteins [BR:
vvy01011
]
Precursor biosynthesis
Amino acid ligase
VV0612
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
Pyr_redox_2
NAD_binding_9
TrkA_N
Thi4
NAD_binding_8
HcgC
NAD_binding_7
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAC93376
UniProt:
Q7MNV3
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All DBs
Position
I:596916..598244
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AA seq
442 aa
AA seq
DB search
MDRWQDIKQVVVVGLGITGLSVVRHLRKTQPQLQVKVIDTRPTPPGVEQLPPDIALHVGS
WNEAWLAEADLVVTNPGIALATPQIQTVLARGVAVVGDIELFAWAADKPVIAITGSNGKS
TVTDLTGVMANACGVKCAIGGNIGVPALDLLEQEVELYVLELSSFQLETTTSLHLVAAAF
LNLSEDHMDRYQGMDDYRQAKLRIFQHAKHGVVNRDDRQTYPETSHGQQSLALVTFGSDD
KEFGVMSHQGESWLSYNQQPILASRELKLVGQHNVANVLVVLALLTCAGIDYRKGLSALK
SYTGLTHRCQVVADNRGIKWVNDSKATNLASTQAALSGLNCAGKLYLLVGGDGKGADFSP
LKPILAQLNLQLCCFGADGDQFMPLHASATRFERMEDVIEHISPQLQSGDMVMLSPACAS
FDQFSNFMARGDRFAELARQYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttggcaagacatcaaacaggttgtggtggtagggctcggtattactgggctc
tccgtcgttagacatttgcgaaaaacacagccgcagttgcaagtgaaagtgattgatacg
cgtccaaccccacctggtgtggaacaattgcctccagacattgcgctgcatgttggcagt
tggaatgaagcttggttagctgaggctgatttggtcgtcacaaacccaggcatcgcctta
gcgacgcctcaaattcaaacggtgttagcacgcggcgttgctgtggtgggtgatatcgag
ttgttcgcttgggcggcagataaacccgtcatcgcgattactggctcaaatggcaaaagc
accgtcacggatttaaccggagtgatggctaacgcctgtggggtgaaatgcgcgattggc
ggtaacattggtgttcctgcactcgatttgttggagcaagaggttgagctttatgtactt
gaactctcgagttttcaattagagacgactaccagtctccatttggttgcagcggcattt
ttgaacctttctgaagatcacatggatcgctaccaaggcatggatgactatcgccaagct
aaactgcgcatctttcagcatgcaaaacatggtgtcgtgaatcgcgatgatcgtcagact
tatcctgaaacttcccatggccagcaatcacttgctttggtgacttttggctccgatgac
aaagagtttggtgtcatgagtcatcagggtgaatcttggttgtcatataaccagcaacct
attttggcaagccgagaactcaaattagtcggtcagcacaacgtggcaaacgtattggtg
gttttggcgctgctgacgtgcgctggtattgattaccgtaaaggcttgagcgctttgaag
tcttacaccggtttgacacaccgatgtcaggttgtcgcagataatcgtggcatcaagtgg
gtcaatgattcaaaagcgacaaatcttgctagtacacaggctgccttatcggggcttaac
tgtgctggcaaactctacctgctggtgggtggagatggcaaaggggctgacttctcgcca
ttgaagccgattttggcgcagctaaacctccaactatgttgttttggtgctgatggtgat
caatttatgccattgcacgcatcggccacgcgttttgagcggatggaagatgtgattgaa
catatatctccacaattacaatctggagatatggtgatgctttcccctgcatgtgctagt
tttgaccaattcagtaattttatggcgcgaggcgatcgattcgccgaattggctcgccag
tatgcatag
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