Vibrio vulnificus YJ016: VV0654
Help
Entry
VV0654 CDS
T00150
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VV0654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV0654
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VV0654
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VV0654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
30K_MP_core
Motif
Other DBs
NCBI-ProteinID:
BAC93418
UniProt:
Q7MNR1
LinkDB
All DBs
Position
I:650641..651522
Genome browser
AA seq
293 aa
AA seq
DB search
MTNSKNRFGNKFIGAHVSAAGGVDNAPLRAREIGANAFALFTKNQRQWVAKPLEEKTISA
FKANCALLGFSPQQILPHDSYLINLGAPEAEKLEKSRLAFIDEMERCQLLGLNLLNFHPG
SHLEKISEKACLYLIAESINLAHQAVPDVVAVIENTAGQGSNLGWRFEHLAEIIEQVEDK
SRVGVCLDTCHTFAAGYDLRTPEACEATFAEFERVVGMHYLRAMHINDSKVKLASKVDRH
HALGKGEIGWDCFEYIAKDSRFDSIPLILETIEPELWPQEIEQLRKYHLSSIA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacagcaaaaaccgttttggtaacaaatttattggcgcgcatgtttcagcggcg
ggcggggttgacaatgcacctctgcgggcgcgtgagattggagcaaacgcgtttgctttg
ttcacgaagaatcaacgtcaatgggttgccaagccattagaagagaaaaccatctcggcg
ttcaaagccaattgcgcgttgttgggtttttctccacagcaaattcttcctcatgattct
tatcttattaatttaggtgcgccagaagcggagaagctggaaaagtctcgtctcgcgttt
attgatgaaatggagcgatgccagctgctagggttgaacttactcaatttccacccaggc
agccatttggagaagatctcagaaaaagcgtgtttgtatttaatcgcagaatcgatcaac
ttagcgcatcaagcggtacctgatgtggtggcggtgatagaaaacacggccggacaaggt
tccaacttaggttggcgatttgagcaccttgcagaaatcattgagcaggttgaagataag
agtcgagttggggtttgtttggatacttgccacacctttgccgcaggctatgatctgcga
actcctgaggcgtgtgaggcgaccttcgctgagtttgaacgtgtggtcggaatgcactat
ttacgtgcaatgcatattaatgattcaaaagtaaaattagccagtaaggtggataggcac
catgccctagggaaaggtgaaattggctgggactgttttgaatacattgcgaaagacagc
cgttttgattctatcccattgattttagaaactattgaacctgaactttggccgcaagaa
attgagcagttgagaaaatatcatctctcttcaatcgcttag
DBGET
integrated database retrieval system
