Vibrio vulnificus YJ016: VV0906
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Entry
VV0906 CDS
T00150
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00550
Peptidoglycan biosynthesis
vvy01100
Metabolic pathways
vvy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VV0906
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VV0906
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vvy01011
]
VV0906
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VV0906
Peptidoglycan biosynthesis and degradation proteins [BR:
vvy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VV0906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BAC93670
UniProt:
Q7MN11
LinkDB
All DBs
Position
I:complement(908526..910418)
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AA seq
630 aa
AA seq
DB search
MMRKRRTTIRDYQAEARLFANRALVSFFGIVALMGVLVTNLYNIQVNQYQDYKTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFDLEITPEKVKNMDATITQLQTLFEITPEQIER
FHRERKRTRRFKSVPILSQLTEKQVAVFSVNQYRFPGVEVSGTLKRYYPYGEILTHVIGY
VSRINDRDMQRLSDEGKEANYQATRDIGKLGIEKFYEDMLHGTAGYQEVEVNSRGRVIRT
LKFVPPVPGKDIVLNIDIKLQTYVHQLLDGRRGSAIVLDPKDNGILAMVSSPSYDPNAFV
HGISGKGYSDLLNDKNRPLVNRSTLGIYPPASTVKPFIAVSALQEGVVTPNTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVNLVQSIEESVDTFFYQIAYDMGIDRLSNWMSMFGFGDYT
GIDIFEESKANMPTRDWKMSRHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGN
VTAPHLLRATIENGEAFDSRELSDYVTYPPIQNVPDRYWNLAKEGMRLVNHGKKGTARRS
FTGMSYMTAGKSGTAQVFGLAEDQEYNADELAEHLRDHALFTGFAPFDDPKIIVTIVLEN
AGGGSSNGAPVARRIFDKVLLDKDSDEVKH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaacgccgaaccacgatacgagattaccaagccgaagcacggttgtttgcc
aatcgtgctctggtgtcttttttcggtatcgtcgccttaatgggcgttctggtgaccaac
ctatacaacattcaggtcaaccagtatcaagattacaaaacccgctcgaatgacaaccgc
attaaagtggtgcccatcgcaccaaatcgtggcttgatttatgatcgcaacggcgtgtta
ttagcggaaaacagaccggtttttgacttggaaatcacaccggaaaaagtcaaaaacatg
gatgccacgattactcagttgcaaactctgtttgaaatcacgccagaacaaatcgaacgt
ttccatcgcgagcgaaaacgcacgcgtcgcttcaaatcggtcccgattctcagtcaactt
acagaaaaacaagtcgcggtattctccgtgaatcaataccgttttcctggcgttgaagtg
tctggcacattgaagcgctactacccttatggcgaaattctcactcatgtgattggctac
gtatcacgcatcaacgaccgagacatgcaacggctgagtgatgaaggtaaagaagccaac
tatcaagcaacacgcgacatcggcaagcttggcattgagaagttttacgaagacatgctc
cacggaacggcaggctaccaagaagtcgaggtcaacagccgtgggcgggtcatccgcacc
ctcaaatttgttccgccagtgcctggcaaagatattgtgttgaacattgatatcaaactg
caaacctatgttcatcagttgctcgacggtagacgaggcagtgcgatcgtactggatcca
aaagacaatggcattttggccatggtatcgagcccaagttatgaccccaatgcgttcgtc
cacggtatttcaggcaaaggttacagcgatcttcttaacgacaaaaaccgcccgttggta
aaccgttcgacgctggggatttacccccccgcttcgaccgtcaaaccctttatcgccgtc
tctgcattgcaagaaggcgtggtaacaccaaacacaaccagaaacgatcctggttattgg
cgcatccccaactccgatacacgtccgttccgtgactggctgcgttggggacatggccga
gtgaacttggtgcaatccattgaagaatcggtcgataccttcttctaccaaattgcttac
gacatgggtattgatcgtctttccaattggatgagcatgtttggttttggtgattacacc
ggcatcgatatctttgaagaaagcaaagccaacatgccaacacgcgattggaaaatgtct
cgtcataaaacaccttggtacaaaggcgataccattcctgttggtattggtcaaggctac
tggacagccaccccaatgcagatcgcaaaagcaacatcggtcttggtaaacgaggggaac
gtgactgctcctcacctactgcgcgccaccattgaaaatggtgaggcgtttgacagccga
gagttgtcggattacgtcacttatccgccgattcaaaacgtaccagacagatactggaac
ctcgctaaagaagggatgcgcttggttaaccatggcaagaaaggcaccgcgcgacgctca
tttaccggtatgtcttacatgaccgcaggtaaatcaggcacagcgcaggtttttggcttg
gcagaagaccaagaatacaacgccgatgagctggccgagcacttacgcgaccacgctctc
tttactggctttgcgccatttgacgatcccaaaatcatcgtcactatagtgttagaaaac
gcgggcggcggctcctccaatggtgctcctgtcgcaagacgtatttttgataaagtgtta
ctcgataaagacagtgacgaggtcaaacactga
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