Vibrio vulnificus YJ016: VV0909
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Entry
VV0909 CDS
T00150
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03030
DNA replication
vvy03430
Mismatch repair
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV0909
03430 Mismatch repair
VV0909
03440 Homologous recombination
VV0909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV0909
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV0909
Enzymes [BR:
vvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV0909
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV0909
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV0909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
BAC93673
UniProt:
Q7MN08
LinkDB
All DBs
Position
I:complement(911298..912323)
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AA seq
341 aa
AA seq
DB search
MRIFADNLAQQLTKELKPVYLIFGNEPLLIQESRSAIQKAAFQQGFEERHRFAVDASLDW
NQVYDCCQALSLFSTRQLIELELPESGVNVSIANELLSVAQILHADIMLVIIGSKLTKAQ
ENAKWFKTLSQQGHWISCLTPDNQRLPQFVLNRCRLLNLKPDQQAVQMLAQWHEGNLFAL
SQSLEKLALLYPDGELNLIRLEESLSRHNHFTVFHWIDALLEGKANRCQKILRQLEAEDI
EAIILLRSLQKELLLLLQMQQQLQQSSMMQVFEKHRIWQNKKPLYTAALTRLKSTKLRQL
LTLLAKAEILAKTQYEQPVWPILQQLSVEMSLPDVELAFKS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatttttgccgataaccttgctcagcaactgacgaaagaactcaaacctgtctat
ttgattttcgggaatgaaccgctactgatccaagaaagccgttctgctattcaaaaagca
gcgtttcaacaaggtttcgaagagcgtcatcgctttgccgtagatgcaagcttagactgg
aatcaagtctatgactgctgccaagctttgagtcttttttccacccgacaactgattgaa
cttgaactgccagaaagcggtgtcaacgtatcaatcgccaacgagttgctttctgtcgct
cagatactgcatgccgatattatgttagtcatcattggcagcaaactcaccaaagcgcaa
gaaaacgcaaaatggttcaaaacattgagccagcaaggccactggatcagttgtctaaca
cccgataatcaacgcctgccacagtttgtattaaatcgctgccgtctactgaatttaaaa
ccagaccaacaagcggtacaaatgctcgcgcaatggcatgaaggaaatctttttgccctc
tctcaaagcctggagaaattggcactgctctatccagacggcgaactcaacttgattcgt
ttggaggaatccctcagtcgacataatcactttactgtttttcactggattgacgcacta
ttagaagggaaagccaaccgctgccaaaaaatcttgcgccaacttgaagcagaagacatt
gaagcgattattttgttgcgctcattgcaaaaagagctgctattgcttttacaaatgcag
caacaactgcagcaaagctctatgatgcaagtgttcgaaaagcaccgaatttggcaaaac
aagaaaccgctctacactgcggctttaactcgactcaagagcactaagctaagacaactg
ctcacattgcttgcaaaggcagagattctggccaaaacgcagtatgagcaaccagtatgg
ccaattcttcagcaattaagcgtcgagatgtctctccctgacgtagagttagcttttaaa
agttaa
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