KEGG   Vibrio vulnificus YJ016: VV1048
Entry
VV1048            CDS       T00150                                 
Name
(GenBank) Rad3-related DNA helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vvy  Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvy03400]
    VV1048
Enzymes [BR:vvy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VV1048
DNA repair and recombination proteins [BR:vvy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VV1048
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C T4SS-DNA_transf UvrD-helicase
Other DBs
NCBI-ProteinID: BAC93812
UniProt: Q7MML9
LinkDB
Position
I:1050972..1052891
AA seq 639 aa
MIAKTFSSKGALGKAIPGFQARQPQIDMAEAVAEAIQQQTQLVVEAGTGTGKTFAYLVPA
LLSGKKVIISTGSKNLQEQLFHRDLPLMTDALGFFGQVALLKGRSNYLCLERLSRQMVEV
HHNESDSTSLSQLVKVRSWSSETKTGDLGDCEELPEDSMIIPTITSTNDNCLGKDCPSYQ
DCFVLKARKKALDADVVVVNHHLFLADLAIKETGFGELIPEADVFIFDEAHQLPDIASEY
FGQSLSSRQILDLAKDIEIAYRTEVKDMRQLQKVGDKLAQTAMDMRIVLGEPGFRGNWRD
ALQSSSIKREVDRLVDALDLTIEVLKLALGRCQLLDVAFERANLIKGRLERVCDTSITGY
SYWFDTSPRHFTLHITPLSVADKFHEQIEIKQGAWIFTSATLAVGDDFSHFTDRLGLKPR
KQFSLPSPFDYAEQARLCVPRYLPEPNSPGLAQKLVSMLAPVIESNQGRCFFLCTSHSMM
RELGERFREVLGLPVLLQGEMSKQRTLAEFMALGNALLVATGAFWEGIDVRGDALSCVII
DKLPFTSPDDPLLKARIEDCRLRGGEPFEQVQLPDAVITLKQGVGRLIRDQKDRGALIIC
DNRLVTREYGGIFLASLPPIPRTRDLDLIQQFLTEQTEN
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgatagcaaaaacgttttcttccaaaggtgctttaggcaaggccattcccggctttcaa
gctcgtcaacctcagatcgatatggccgaagcggtcgccgaggcgatccaacagcaaaca
cagcttgtggttgaagcggggaccggaaccggtaaaaccttcgcttatctggtgccagct
ctgctaagtggcaaaaaggtcattatttctaccggttcgaaaaacttgcaagaacagctt
tttcatcgtgatttgccgctcatgaccgatgcgttaggcttttttggacaagtcgcgttg
ttgaaaggccgctccaactatttgtgtttagagcgtttaagccgacaaatggtcgaagtg
catcacaatgaatcggattccacgtcattaagccaattggtcaaagtgcgcagttggtct
tcggaaaccaaaacgggcgatttgggtgattgtgaagagttgccagaagacagcatgatc
atacccaccatcacgtcaaccaatgacaactgcttaggcaaagattgtccaagttaccaa
gattgctttgtgttaaaagcgcgaaagaaagcgctggatgccgatgtggtggtggtgaac
catcacctttttcttgccgacctggcgatcaaagaaaccggttttggtgagctgatcccc
gaagcggatgtgtttatttttgatgaggcgcatcaactacctgatattgcgagcgaatat
tttggtcagtcactctccagccgccagattctcgatttggccaaagacattgaaattgcc
taccgcacggaagtgaaagacatgcgtcagctgcagaaagtgggagataaattagcccaa
accgcaatggatatgcgcattgtgctgggtgagcctggctttcgtggcaattggcgtgat
gccttacagtcgtcatccatcaagcgcgaagtggatcgcttggtggatgcgttggatttg
accatcgaggtactcaagctcgcgttaggtcgctgccaattgcttgatgtggcgtttgag
cgcgctaacctcattaaaggtcgtttagaacgagtgtgtgacactagcatcacgggctat
tcgtactggtttgatacctcgccgcgccattttacattgcacatcacgccgctctcagtt
gcggacaaatttcatgagcaaatagagatcaaacagggcgcgtggatcttcacctcggcc
acgttggcggtgggggacgattttagtcattttaccgaccgcttaggcttaaagccgcga
aagcaattctcattgccaagtccatttgattatgccgagcaggcgcgattgtgcgtccct
cgctatctaccagagcccaatagcccaggtttggcgcaaaaactggtgagcatgttagct
ccggtgatcgaatccaaccaagggcgctgtttcttcctctgtacttcacattcgatgatg
cgtgaattgggcgagcgttttcgcgaggttttaggcttgcccgttttattgcaaggcgag
atgagcaaacagcgcacgcttgctgaatttatggcgttggggaatgccttgctggtggcc
actggcgctttttgggaaggaatcgatgttagaggtgacgccttaagctgtgttatcatc
gacaaacttccttttacatcaccagatgacccgctacttaaagctcgtatcgaagattgt
cgattacgaggcggagagccgtttgagcaagtacaactgcctgatgcagtcattacgctc
aaacaaggggtagggcgtctgattcgagatcaaaaagatcgcggggctttaatcatctgt
gacaaccgcttggtcacaagagagtacggcggcatttttcttgccagcttacctccgatc
ccgagaacccgtgatttggatttgattcaacaatttctaacagaacaaacagagaactga

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