Vibrio vulnificus YJ016: VV1054
Help
Entry
VV1054 CDS
T00150
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vvy
Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvy03016
]
VV1054
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
VV1054
Transfer RNA biogenesis [BR:
vvy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VV1054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAC93818
UniProt:
Q7MML3
LinkDB
All DBs
Position
I:1057224..1058396
Genome browser
AA seq
390 aa
AA seq
DB search
MPAEFQGWHFYFQSDSERRVNYQIITENQDLARVCSKAREADVVMLDTEFVRTRTYYPQL
GLIQLFDGDSLSLIDPTVLTDMSAFTELLNDASVMKVLHACGEDLEVFHNAFGAMPVPMV
DTQIMAAFLGHGLSTGFAALVEQYLNVELDKSESRTDWLARPLSDKQLEYAAADVHYLLP
LYEILLEKVMAAGWWQAAQQESELQASKRVKTPNADNAYLDIKGAWQLKPRELAILKPLA
TWRMQEAIRRDLALNFVFKEHDLLTVARLGLTSFKRMEEEGMDVRSVQRHGNRIAAMVKS
ARETDPEDYPAPIERLMDLPGYKQLFKKLKDEVTHASKATGLASEFLASKKQTNQLISWV
WKHQRDQNRLPDLMQGWRLDILGEKMNKLI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgaattccaaggctggcatttttattttcaaagcgatagcgagagacgagtg
aattaccaaattattaccgaaaaccaagacctagctagggtatgcagtaaagcgcgcgaa
gcagacgttgtgatgttggataccgagtttgtccgcacccgaacgtattacccacaattg
ggcttaattcagctttttgatggtgacagcctctcgctgattgatccaacggtgctgact
gatatgagtgcgtttactgagttgcttaacgatgcctcggtaatgaaagtgcttcacgcg
tgcggtgaggatttggaagtgttccacaacgcgtttggcgcgatgccggtgccgatggtg
gatacgcaaatcatggccgcatttttgggtcacggtctatcgacgggctttgccgccttg
gtcgagcagtaccttaacgtggaactggataagagtgagtcgcgcacggactggttggct
cgccctctgagtgacaaacagcttgagtacgcagcagcagacgttcactacttgttgccg
ctgtacgaaatcttgctggaaaaagtgatggcagcgggctggtggcaagcggctcagcaa
gagagcgaactgcaagcaagcaagcgcgtaaaaacgccgaatgccgacaatgcttatctc
gatatcaaaggggcttggcagcttaagccaagagagcttgcgatactcaagccgcttgcg
acttggcgtatgcaagaggcgattcgtcgtgacttagcgttgaactttgttttcaaagaa
cacgacttactcacggtggctcgtttaggcctgacgagctttaagcgcatggaagaagag
gggatggatgttcgttctgtacagcgtcatggcaaccgcattgctgcgatggtgaagtcg
gcgcgtgagactgatcctgaggattatccagcaccaattgaacgcttgatggatttgcca
ggttacaaacaactgtttaaaaaactgaaagacgaagtcactcacgcttcgaaagcgaca
ggtttagcgagcgagtttttagcgtcgaagaagcagactaatcaactgatcagttgggta
tggaaacatcagcgcgatcaaaatcgcctgccagacttgatgcaaggttggcgcttagac
attctgggcgaaaaaatgaacaagctaatttag
DBGET
integrated database retrieval system
