Vibrio vulnificus YJ016: VV1107
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Entry
VV1107 CDS
T00150
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vvy
Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV1107
03036 Chromosome and associated proteins [BR:
vvy03036
]
VV1107
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV1107
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VV1107
Chromosome and associated proteins [BR:
vvy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VV1107
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VV1107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
VWA_2
GTP_EFTU_D2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAC93871
UniProt:
Q7MMG4
LinkDB
All DBs
Position
I:1115115..1115408
Genome browser
AA seq
97 aa
AA seq
DB search
MAQRGITVNKTQLVESIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVR
TRAARTGRNPKTGEEIQIAEAKVPSFKAGKALKDACN
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaggggaatcacagtgaacaaaactcaactagtagaatcaatcgctgcaaac
gcagatatctctaaagcgtcagcaggtcgtgctctagatgcattcattgaagcagtaagc
ggtactcttcagtctggtgatcaagtagctctagttggtttcggtactttcagcgtgcgt
actcgcgcagctcgtacaggccgtaaccctaagactggtgaagagatccaaatcgcagaa
gcgaaagtaccatctttcaaagcaggtaaagctcttaaagacgcttgtaactaa
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