Vibrio vulnificus YJ016: VV1247
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Entry
VV1247 CDS
T00150
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vvy
Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV1247
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV1247
Enzymes [BR:
vvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VV1247
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Topoisomerases
VV1247
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VV1247
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAC94011
UniProt:
Q7MM26
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All DBs
Position
I:1264566..1267268
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AA seq
900 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKI
YMRSKAEIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELKKARDRAHILEALALALANIDEIIELIRNAATPAEAKAGLVARGWDLGNVA
AMLESAGTDAARPDWLEPQYGIRDGQYFLTETQAQAILDLRLHKLTGLEHEKILDEYKAL
LDEIKELMHILASTERLMEVIREELEMVRDAFGDVRRTEITAASHDIDLEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILLFSTRGKTYR
MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSADKFIFMATGDGTVKKTSLD
QFSNVRANGLIAVNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKEAEESPVLDENGNP
VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKNDGDVLTVTENGYGKRT
VLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVEDGDEFMMITDAGTLVRTRVAEVSQVG
RNTQGVTLIRTAEDESVVGLQRIDEVEETELPEGEEADATEQVPQAQDPQADNDDAAEQE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagctaagaggttca
taccttgactacgcgatgtccgttatcgtgggtcgtgctcttccggatgtgcgtgatggc
ctaaaaccagtacaccgccgcgtgctttacgcgatgaatgtactaggcaacgactggaat
aaaccatataaaaaatctgcccgtgtcgtcggcgacgtaatcggtaaatatcaccctcat
ggtgacagtgcggtatacgacaccatcgtgcgtatggcacaaccgttctcgctacgttac
atgctggtcgatggccaaggtaactttggttcgatcgatggtgactccgcggcagcaatg
cgttataccgaagttcgcatggcgaaaatcgcccacgagcttttggctgacctagataaa
gaaaccgtggattacgtgccgaactatgacggtacagaacagatcccagcggttcttcct
acgaaaattccaaacctgctggtcaacggttcttccggtatcgcagtaggtatggcaacc
aacattcctccgcacaacttgacggaagtgattgatggctgccttgcatacatcaataac
gaagccatcacgattgatgagctgatggattacattcctggtccagatttccctacggct
gctttgattagcggacgtaaaggcattattgacgcgtacaaaactggtcgcggcaaaatc
tacatgcgttcaaaagcggaaatcgaagtcgagaagaatggcaaagaaaccatcatcgtt
actgagatcccatatcaagtgaacaaagctcgtttgatcgaaaagatcgctgagctagtg
aaagataagaaagtagaaggcatcagtgcactgcgcgacgagtcggacaaagacggtatg
cgtattgttattgaatgtaagcgcgacgcagtgggtgaagtggttctaaacaacctttac
gcccaaactcagctgcaaacgactttcggcatcaacatggttgcgcttgataatggccag
ccaaagttattcaacttgaaagagatgttgaagtgcttcgttgatcaccgtcgtgaagtg
gtcactcgtcgtactatcttcgaactgaagaaagcacgcgatcgtgcccatatccttgaa
gcgttggctctggctcttgcgaacatcgatgaaatcatcgaattgatccgtaacgccgcg
actccagcagaagcgaaagcaggcttagtggctcgtggctgggatctgggcaacgtggct
gctatgcttgaaagcgccggaactgacgctgctcgtccagattggcttgaacctcaatat
ggcatccgtgatggtcagtacttcctaacggaaacccaagcgcaagcgatccttgatcta
cgcctacataaactgacaggcctagagcacgagaagatcctagacgagtacaaagcgcta
ttagacgaaatcaaagagttgatgcatatccttgcaagcactgaacgtttgatggaagtg
attcgtgaagaacttgaaatggtccgtgatgcattcggcgatgtacgtcgtactgaaatc
accgctgcgagccatgacattgatcttgaagagctgatcgctcgtgaagacgttgttgtg
acgctttctcacgaaggttacgttaagtaccaaattctaagcgactacgaagcacaacgt
cgtggtggtaagggtaagagcgcaaccaagatgaaagatgaagattacatcgaacgtcta
ttggtcgcgaacacgcacgacaacattttgttgttctcaacgcgtggtaagacttaccgc
atgaaagtataccaattgcctctcgcaagccgcacggctcgtggtaagccaattgtgaac
ctactaccgctggaagaaaacgaacgtattacggctattctaccggtaacagagttcagt
gctgacaagtttatcttcatggcaactggcgatggtacggtgaagaagacctcacttgat
caattctccaacgttcgtgcaaatggtcttatcgctgtgaacctacgtgatgaagattcg
ctgattggtgttgatatcactgacggcgaaagcgaaatcatgctgttctctaaatttggt
aaagtggtgcgcttcaaagaagcagaagagagcccagtactggatgaaaacggtaaccca
gttcttgatgagaacggtcagccagagatcaagttcaaaggcgtgcgacctatgggccgt
accgcggcaggtgttcgtggtatgaaactcgctgatggcgatcaagttgtgtcactgatc
gtaccgaagaatgacggcgatgtccttactgtgactgaaaacggttacggcaaacgtact
gtgctttcagagtacccaaccaaaggccgcggcactcagggtgttgtgtctattaaggtt
tctgagcgtaacggtagtgttgttggcgcggttcaagttgaagacggtgacgaattcatg
atgatcacggacgctggtacactagtacgtactcgtgtggcggaagtgagccaagtgggt
cgtaacactcaaggtgtcaccctgatccgtactgcagaagacgaatcggttgtgggctta
cagcgcattgatgaagttgaagaaactgagttgccagaaggcgaagaagcggacgcaact
gagcaagtacctcaggcacaagatcctcaagcagacaacgatgacgcagccgagcaagag
taa
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