Vibrio vulnificus YJ016: VV1281
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Entry
VV1281 CDS
T00150
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03030
DNA replication
vvy03430
Mismatch repair
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV1281
03430 Mismatch repair
VV1281
03440 Homologous recombination
VV1281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV1281
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV1281
Enzymes [BR:
vvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV1281
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV1281
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV1281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
BAC94045
UniProt:
Q7MLZ5
LinkDB
All DBs
Position
I:1300879..1301835
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AA seq
318 aa
AA seq
DB search
MTHYPWLASTWQGLQSAMSAQRLPGAILLQSDVELGVDELIEKFSAALLCKTYPDEGCGF
CHSCELLKSQNHPDLHFIRPEKEGKAITVEQIRQCNRQAQESSQMDGYRLFVIEPAEAMN
ESASNALLKTLEEPSGSCLFLLICHDKKRLLPTIISRCQQWSITPPAVSESMQWLQQKGV
IVNESFLKLAHYSPVTAMHMAKESEFQHYEKLERQFVDFLIQADSDYVSLCQTIQAATLR
NLSWLWLLLSDAQKVHFGLQNEETLQGSHALGQLPLSGLQTSMVKLNQLNQQLHQFSGLN
EELMIINWLIETREALCL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgacacactatccttggttagcatcgacatggcaagggctgcagtccgccatgtcggca
cagcggttacctggtgccatcttgttgcaatctgacgttgagctcggtgttgacgagctt
atcgaaaagttttcggcggctttgctgtgtaagacataccctgatgagggttgtggcttt
tgccatagttgcgagctgttaaagtcgcaaaaccatcctgatcttcatttcattaggcca
gagaaagaaggcaaggctattactgttgagcagatacgccaatgtaaccgtcaggcacaa
gaatcttctcaaatggacggatatcgtttgtttgttatcgaacctgcggaggcgatgaac
gaatcggcttcaaatgcgttgttgaaaacattggaagagccgtctgggagctgcctattt
ttgttgatttgccacgataagaaacggttgttgcccactatcatcagccgttgtcagcag
tggagcattacgcctcctgcggtctcggagtcaatgcaatggttgcagcaaaaaggggtc
atcgtgaatgagtcctttttgaaactggctcattactcgcccgtgacggcaatgcacatg
gcaaaagaatcagagtttcaacactatgaaaaactcgaaagacagtttgtggatttctta
attcaggcggattccgactacgtgtcactatgtcagacaattcaagccgcgacgttacgt
aatctctcgtggttgtggttactgctttctgatgcgcagaaggttcattttggcttgcaa
aatgaagaaacattgcaaggtagtcacgcgctagggcaactgcctttgagcggattacaa
acctcaatggtaaaactcaatcaattaaatcaacagttacatcagttttcgggtttaaac
gaagaactgatgatcatcaactggttaatcgaaactagagaggcattatgtttgtag
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