Vibrio vulnificus YJ016: VV2411
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Entry
VV2411 CDS
T00150
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03030
DNA replication
vvy03430
Mismatch repair
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV2411
03430 Mismatch repair
VV2411
03440 Homologous recombination
VV2411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV2411
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV2411
Enzymes [BR:
vvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV2411
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV2411
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV2411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_2
AAA_14
ResIII
AAA_18
EAL
AAA_24
TsaE
SKI
AAA_assoc_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAC95175
UniProt:
Q7MIV2
LinkDB
All DBs
Position
I:complement(2440890..2443082)
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AA seq
730 aa
AA seq
DB search
MSYLALARKWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAK
ALNCEKGITSAPCGQCDTCREIEEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITV
DAIHQQLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHM
LGTIDTDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPS
SLDKAQPDAEKIELLSRALSPQDVQLFYQIALKGRDDLSLAPNGRIGMEMIVLRMMAFRP
ADVSQANIISAQGANLASAPAAQSAAPQVSTSPAQTAPAMSAKPSSERVAPAERPQAVSH
APSRLASSMNAPSSVAPQPVQTEMPPQYDAPPMDYADYPPMDDMPPMGYGYEDAAALQPE
PQPAPQQAPERASPAPGGLTGLRHQLRSQRQGLAQNGGSKKSKAASAEKESVLDRVAQKQ
ATAAQVSPRQSLAPSEPEVKEDEPYQWRPSQPVVQSKSKELTPTEIKRALEHEKTPEMAE
KLVAESLEQSEWAKLITQLETAKLVEQLALNSAFNKEGSTIALTLRSHQQHLNTDKAQKE
LLSALNETLGETCHLSVEVGGQGETPLELRERLYQQKLQQAFTSLENDTHVQFILRRFSA
ELDRDSVRPV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtccgcgtcaatttaaagaagtggtgggg
caaggccatgtgctgactgccctagaaaatgctcttgagcacaatcgtctgcaccatgct
tacttgttcagtggcacacgaggtgtgggtaaaacctcgattggtcgcttgtttgccaaa
gctctcaactgcgaaaagggcatcacctcagcgccttgtggacaatgtgatacctgccga
gagattgaagaagggcgcttcgttgatctattggagattgacgccgcatcgcgtactaaa
gttgaagacactcgtgaactgttagacaacgttcaatacaaaccagcgcgcggtcgtttc
aaggtttacttgatcgacgaagtgcacatgctctcgcgtcactcttttaatgcgttactc
aaaaccttagaagagccgccagagtatgtgaaattcctattggcaacgacggatccacag
aaacttcctgtgacgattttgtctcgttgtttgcagttccaccttaagccgatcacggtt
gatgctatccatcaacagctcgattttattttggcgaaagaaggtgtcactgctcaagca
cgtgcgcttggcatgatcgcgcatgctgccgatggcagtatgcgtgatgccctaagctta
accgatcaagcaattgcgttaggcaatggtcagattgaaactgatctggtcagccatatg
ttaggcaccattgataccgaccaagcgatccatctcttagaagccattagcagcaagcag
ccacaagtggcgatggataagattcagcagctcgcgcaaaatggtgcggagtgggatggt
ttgttgcaacaattggcgactcagctgcatcgcattgccatgtaccagctgttgccttca
agtctagacaaagcgcagcctgatgcagaaaaaattgagctgcttagccgtgcactgtca
ccacaagatgttcagctgttttatcagattgccttaaaagggcgtgatgatctctctttg
gccccaaatgggcgtatcgggatggaaatgattgtgttgcgtatgatggcatttcgtcct
gcggatgtgtcgcaagcgaacatcatttctgcgcaaggtgcgaatttagcatcggctccg
gcagctcaaagtgccgctcctcaagtgagtacgtcgccagcccaaacggccccggcgatg
agcgcaaagccaagctctgaacgggttgctcccgcagaacgtcctcaagcggtcagtcac
gcgccatcgcgtctcgcttcatcgatgaatgccccaagttctgtggcccctcagcctgtt
cagacagagatgccacctcaatatgatgcgccaccgatggattatgccgattatccacct
atggatgacatgccgccaatgggttatggctatgaggatgcagccgcattgcagcctgag
cctcaacctgcgccgcagcaggcgcctgaaagggcaagtccagctcctggtggcttaacc
ggtttgcgtcatcaattgcgttctcaacgtcaagggttggcacaaaatggtggctcaaaa
aagtctaaagcggcatctgctgagaaagagtcggtcctcgatcgagtcgcgcaaaagcag
gcaactgcagcgcaggtgtcgccacgtcaaagccttgcgccgtcagagcctgaagtaaaa
gaggatgaaccctatcaatggcgtccgagtcagcctgtggtgcaatctaagagcaaagag
ctgacaccgacggaaattaaacgcgcacttgagcacgaaaaaacgccagaaatggcggaa
aaactcgttgcagaatcgctcgagcagagtgagtgggcgaaattgatcacccagctcgaa
acggcaaaattggtggaacagttagcgctcaactcggcgtttaacaaagagggttcaacc
atcgctttgacgctgcgtagccatcaacaacatttaaataccgataaagcgcaaaaagag
ctactctcagcgctcaacgaaacgctgggtgaaacttgccatctctctgtggaagtcgga
gggcaaggtgagactcctctagagttacgcgaaaggctttatcagcaaaaattacagcag
gctttcactagcctggaaaatgacacccatgttcagtttatactgcgccgattcagtgca
gaactggacagagacagtgttcgccctgtctga
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