Vibrio vulnificus YJ016: VV2440
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Entry
VV2440 CDS
T00150
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00071
Fatty acid degradation
vvy00280
Valine, leucine and isoleucine degradation
vvy00310
Lysine degradation
vvy00362
Benzoate degradation
vvy00380
Tryptophan metabolism
vvy00410
beta-Alanine metabolism
vvy00640
Propanoate metabolism
vvy00650
Butanoate metabolism
vvy00907
Pinene, camphor and geraniol degradation
vvy00930
Caprolactam degradation
vvy01100
Metabolic pathways
vvy01110
Biosynthesis of secondary metabolites
vvy01120
Microbial metabolism in diverse environments
vvy01200
Carbon metabolism
vvy01212
Fatty acid metabolism
Module
vvy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VV2440
00650 Butanoate metabolism
VV2440
09103 Lipid metabolism
00071 Fatty acid degradation
VV2440
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VV2440
00310 Lysine degradation
VV2440
00380 Tryptophan metabolism
VV2440
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VV2440
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VV2440
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VV2440
00930 Caprolactam degradation
VV2440
Enzymes [BR:
vvy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VV2440
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VV2440
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VV2440
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
YcaO
Motif
Other DBs
NCBI-ProteinID:
BAC95204
UniProt:
Q7MIS5
LinkDB
All DBs
Position
I:complement(2473244..2475361)
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AA seq
705 aa
AA seq
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MSEQKAFNLKIDEQNIAWLGIDVPNEKMNTLQAAFADEMKAIFAQLKDSSGLKGLIVHSL
KPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLSDLPYPVVAAIHGPCLGGGLELA
LACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAK
KLGVVDACVPQTILLDVAKQFVEKGKKRAKQKVTTKEKLLSGSGLGRKFVFEQAAKKTHE
KTRGNYPATVAILQVIQHGLEKGMKQGLELEAKRFGELVMSNESKALRSIFFATTEMKKE
TGSEAKPSKVGMVGVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLFDK
QRKRRILSKAQLQSKMLQLSGGTDFTSFNRTDVVIEAVFEDLSLKQQMVADIEANAKPET
IFATNTSSLPIHKIAEKAQRPENIVGLHYFSPVEKMPLVEVIPHESTSEETIATVVALAK
KQGKTPIVVKDQAGFYVNRILAPYMNESAHILLANEPIDKIDTALLDFGFPVGPITLLDE
VGVDIGAKIMPILVAELGARFKGPDVFDVLLNDGRKGRKSGKGFYTYKGKKKEVDKSVYK
LLKLTPESKLSDNDIALRCVLPMLNEAVRCLDDGIIRSPRDGDIGAIFGIGFPPFLGGPF
RYMDQFGLKELVEKMNQFAEKYGDRFAPCDGLLTRAGEGRRFYDN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaaaaagcgtttaatctaaagattgatgagcagaacattgcgtggcttggc
attgatgttccaaacgaaaaaatgaatacccttcaagcggcttttgccgatgaaatgaag
gcgatttttgctcaactgaaagacagcagtggcctgaaagggctgatcgtgcattcgttg
aaacctgacaactttgttgcaggcgcggatgttcgaatgctagaagcgtgcaaaacggct
cctgaagcagaagcccttgcacgccaaggacaagagttatttcaacaactttctgatttg
ccttatccagtggtggctgcaatccatggcccgtgtctgggtggcggtttggaattagcg
ttagcgtgtgattttcgtgtgtgtagtgacgacgacgccactcgtcttggtttaccagaa
gtccagcttggtctattaccgggctctggtggtactcagcgtctccctcgtttgattggt
cttcttccttcattggatctgatcctgacgggtaaacagcttcgagccaagaaagccaag
aaattgggcgttgttgatgcctgtgtgccacaaactattttgttggatgtggcgaagcag
tttgttgaaaaaggcaagaagcgcgcaaaacaaaaagtgacgacaaaagagaaattgctc
tctgggagtgggctagggcgtaagtttgtgtttgaacaagcggcgaaaaaaacgcacgaa
aaaacacgtggtaactaccctgcgactgtcgccattttgcaagtcatccagcatggcctt
gaaaaaggaatgaaacagggcttggagctggaagcgaagcgctttggtgagttggtcatg
agcaacgagtcgaaggctttgcgttcgattttctttgccaccacggaaatgaaaaaagaa
acgggcagtgaagcaaaaccaagtaaagtcggaatggtcggcgtacttggcggcggcttg
atgggtgcgggtatcagtcatgtcagtgtggcgaaagccaaagtgccagtacgcattaaa
gacgtcagcaatgacggcgtgctgaacgccttgaaatacaactacaagttgtttgataag
cagcgcaaacgtcgcattctctccaaggcgcaactgcagagcaaaatgctgcaattgagc
ggaggaaccgatttcaccagctttaaccgtaccgacgtggtgattgaagcggtctttgaa
gatctgtcgctcaagcaacaaatggtggcggacattgaagcaaatgcgaagccggagact
atcttcgcgacgaatacctcttctttgccaatccataaaattgccgagaaggcgcagcgg
cctgagaacattgtgggtttgcactactttagtccggtagagaaaatgcccttggtggaa
gtcattccgcatgaatcaacgtcggaagaaaccattgccacggtggttgctttggcgaag
aaacaaggcaaaacgccgattgtggtgaaagatcaagcgggtttctatgtgaaccgaatt
cttgcgccgtacatgaatgaatctgcgcacattttgctagcaaatgagccgatcgataag
atcgatactgcgttgttggattttggcttccctgtcggtccaattacgttgctggatgaa
gtgggtgtagatattggtgcgaagatcatgcctatccttgtcgctgagttgggtgctcgc
tttaaagggccggatgtgtttgatgtgcttctcaatgatggccgcaaaggtcgcaagagc
ggaaaaggcttctacacctataaaggcaagaagaaagaagtggataagtccgtttacaaa
ctgctgaaactcaccccagagtcgaagctgagcgacaatgacattgcgctgcgttgtgtg
ttgccaatgctcaacgaagcggtacgctgtttggatgatggcattattcgttctcctcgc
gatggcgacattggggctatcttcggtatcggcttccctcctttcttaggtggcccgttc
cgttatatggaccaatttggtttgaaggaactggtagagaaaatgaaccaattcgctgag
aaatatggcgatcgctttgcgccgtgtgatggtttactcacgcgtgcgggagaaggacgt
cgtttctatgacaactag
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